NonredundantMotifs:152: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=57659
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZBTB4!METH_f1
|name=known152
|representative_motif_db=HOCOMOCO
|representative_mot...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.824217935286192;25.406256517710496;5.769525547003328;0.0!2;18.81251303542096;4.945307611717152;5.769525547003328;2.472653805858573!3;27.878910323569055;2.472653805858573;1.6484358705723807;0.0!4;2.472653805858573;0.824217935286192;8.28125130354208;20.421876955313152!5;20.421876955313152;0.0;11.578123044686848;0.0!6;6.070312825885536;0.0;25.929687174114495;0.0!7;0.0;21.46873826812115;0.0;10.531261731878848!8;0.0;0.0;32.0;0.0!9;12.179697602451231;0.0;12.402340979973056;7.417961417575712!10;0.0;0.824217935286192;7.156246089373728;24.019535975340094!11;6.014651981505056;3.502926224966304;12.647467414474784;9.834954379053825!12;0.824217935286192;0.0;26.49218978119869;4.683592283515136!13;0.0;10.531261731878848;5.769525547003328;15.699212721117824!14;2.7734410847407585;0.824217935286192;28.402340979973054;0.0!15;8.693360271185185;4.533198644074048;14.24024244066672;4.533198644074048 | |||
|entrez_gene_id=57659 | |entrez_gene_id=57659 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:ZBTB4!METH_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ZBTB4!METH_f1 | ||
|name= | |name=non-redundant152 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=ZBTB4!METH_f1 | |representative_motif_id=ZBTB4!METH_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant152
- db :HOCOMOCO
- Id :ZBTB4!METH_f1
- name :
- score :1.4482110863766893
- External refs:
- Internal refs:
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Sub Motif Members
