NonredundantMotifs:145: Difference between revisions
From FANTOM5_SSTAR
m (Autoedit moved page NonredundantMotifs:Motif145 to NonredundantMotifs:145 without leaving a redirect: NSchange) |
|||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.171818474794893;0.301056158269957;0.272983710858808;0.254141656076342!2;0.302395808449779;0.167175520870631;0.303663804996695;0.226764865682895!3;0.143417743379079;0.268924854357836;0.0925163619061908;0.495141040356894!4;0.279634036258407;0.190553864351617;0.254921512922246;0.27489058646773!5;0.282521793091176;0.364494257325439;0.178653788678072;0.174330160905313!6;0.67180794910238;0.0580293024285749;0.0596476368157696;0.210515111653276!7;0.834274386241542;0.0732992285220956;0.0527562068364571;0.0396701783999056!8;0.0374260265202901;0.0541624682468082;0.0972876506622248;0.811123854570677!9;0.781687011470387;0.119873477031243;0.0595360771638669;0.0389034343345037!10;0.094411302375252;0.739417658113489;0.148945962228046;0.0172250772832127!11;0.121495542183723;0.182463683422598;0.688059185511045;0.00798158888263429!12;0.531845124553274;0.0585129870779191;0.264994447871685;0.144647440497122!13;0.406274049878601;0.102159448175403;0.285680702665462;0.205885799280533!14;0.434643007022191;0.139451979646365;0.187266769412023;0.238638243919421!15;0.151869112283505;0.281521051645057;0.246109594746648;0.32050024132479!16;0.351313940798544;0.200542211760488;0.276808714681745;0.171335132759223!17;0.442449108531442;0.213938960974302;0.210894821994709;0.132717108499547 | |||
|entrez_gene_id=10865 | |entrez_gene_id=10865 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Arid5a_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Arid5a_secondary;SCI09 | ||
|name= | |name=non-redundant145 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Arid5a_secondary | |representative_motif_id=Arid5a_secondary | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant145
- db :UNIPROBE
- Id :Arid5a_secondary
- name :SCI09
- score :0.010689289860944869
- External refs:
- Internal refs:
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
