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|PWM=P0;A;C;G;T!1;4.997596153846153;0.2379807692307694;5.526442307692307;0.2379807692307694!2;0.0;4.759615384615388;5.288461538461541;0.9519230769230764!3;2.8557692307692353;5.288461538461541;0.9519230769230764;1.9038461538461529!4;0.9519230769230764;0.0;5.288461538461541;4.759615384615388!5;0.0;0.9519230769230764;8.144230769230765;1.9038461538461529!6;0.0;2.432692307692306;8.567307692307693;0.0!7;0.0;2.8557692307692353;8.144230769230765;0.0!8;8.567307692307693;0.0;2.432692307692306;0.0!9;0.0;0.0;10.048076923076918;0.9519230769230764!10;2.8557692307692353;0.0;5.288461538461541;2.8557692307692353!11;0.9519230769230764;0.0;3.3846153846153877;6.66346153846154!12;0.9519230769230764;0.9519230769230764;6.240384615384611;2.8557692307692353!13;0.0;0.5288461538461541;10.471153846153847;0.0!14;0.9519230769230764;1.9038461538461529;7.192307692307693;0.9519230769230764!15;0.9519230769230764;0.0;8.144230769230765;1.9038461538461529!16;0.5288461538461541;4.759615384615388;5.71153846153846;0.0!17;0.2379807692307694;4.997596153846153;4.574519230769235;1.189903846153847
|PWM=P0;A;C;G;T!1;4.997596153846153;0.2379807692307694;5.526442307692307;0.2379807692307694!2;0.0;4.759615384615388;5.288461538461541;0.9519230769230764!3;2.8557692307692353;5.288461538461541;0.9519230769230764;1.9038461538461529!4;0.9519230769230764;0.0;5.288461538461541;4.759615384615388!5;0.0;0.9519230769230764;8.144230769230765;1.9038461538461529!6;0.0;2.432692307692306;8.567307692307693;0.0!7;0.0;2.8557692307692353;8.144230769230765;0.0!8;8.567307692307693;0.0;2.432692307692306;0.0!9;0.0;0.0;10.048076923076918;0.9519230769230764!10;2.8557692307692353;0.0;5.288461538461541;2.8557692307692353!11;0.9519230769230764;0.0;3.3846153846153877;6.66346153846154!12;0.9519230769230764;0.9519230769230764;6.240384615384611;2.8557692307692353!13;0.0;0.5288461538461541;10.471153846153847;0.0!14;0.9519230769230764;1.9038461538461529;7.192307692307693;0.9519230769230764!15;0.9519230769230764;0.0;8.144230769230765;1.9038461538461529!16;0.5288461538461541;4.759615384615388;5.71153846153846;0.0!17;0.2379807692307694;4.997596153846153;4.574519230769235;1.189903846153847
|entrez_gene_id=28999
|entrez_gene_id=28999
|motif_cluster_2013_march_motif_members= /SWISSREGULON:EP300.p2 /HOCOMOCO:KLF15_f1
|motif_cluster_2013_march_motif_members= /HOCOMOCO:KLF15_f1 /SWISSREGULON:EP300.p2
|name=known119
|name=non-redundant119
|representative_motif_db=HOCOMOCO
|representative_motif_db=HOCOMOCO
|representative_motif_id=KLF15_f1
|representative_motif_id=KLF15_f1
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[[Category:Motif]]
[[Category:Motif]]
[[Category:MotifCluster2013March]]
[[Category:MotifCluster2013March]]
[[Category:NonRedundantMotifCluster]]

Latest revision as of 10:21, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant119
  • db :HOCOMOCO
  • Id :KLF15_f1
  • name  :
  • score :4.499648167339441
  • External refs:
EntrezGene:28999
UniProt:28999

  • Internal refs:
EntrezGene:28999


Motif matrix
P0ACGT
14.9975961538461530.23798076923076945.5264423076923070.2379807692307694
20.04.7596153846153885.2884615384615410.9519230769230764
32.85576923076923535.2884615384615410.95192307692307641.9038461538461529
40.95192307692307640.05.2884615384615414.759615384615388
50.00.95192307692307648.1442307692307651.9038461538461529
60.02.4326923076923068.5673076923076930.0
70.02.85576923076923538.1442307692307650.0
88.5673076923076930.02.4326923076923060.0
90.00.010.0480769230769180.9519230769230764
102.85576923076923530.05.2884615384615412.8557692307692353
110.95192307692307640.03.38461538461538776.66346153846154
120.95192307692307640.95192307692307646.2403846153846112.8557692307692353
130.00.528846153846154110.4711538461538470.0
140.95192307692307641.90384615384615297.1923076923076930.9519230769230764
150.95192307692307640.08.1442307692307651.9038461538461529
160.52884615384615414.7596153846153885.711538461538460.0
170.23798076923076944.9975961538461534.5745192307692351.189903846153847

Sub Motif Members

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