NonredundantMotifs:103: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=3195
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TLX1_f1~TLX1_f2
|name=known103
|representative_motif_db=HOCOMOCO
|representative_mo...") |
m (Autoedit moved page NonredundantMotifs:Motif103 to NonredundantMotifs:103 without leaving a redirect: NSchange) |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;5.451147277977354;19.02635715242718;8.786030274546938;17.736465295048525!2;0.8111877559223319;5.678314291456308;42.07693468485439;2.4335632677669956!3;0.0;21.589607135679614;17.152444552605143;12.257948311715241!4;0.0;28.19661086129448;2.4335632677669956;20.36982587093856!5;47.7552489763107;1.6223755118446639;0.8111877559223319;0.8111877559223319!6;43.533068369466086;4.43716258307443;1.4073935356148832;1.6223755118446639!7;0.0;9.900494898300979;22.18581291537215;18.91369218632687!8;16.12627482045306;0.8111877559223319;22.830758844061503;11.231778579563104!9;23.64194659998384;3.029769047459547;8.798215311796142;15.530069040760521!10;1.6223755118446639;0.0;38.06973605423953;11.307888433915851!11;6.274520071148895;24.49452617978965;12.549040142297738;7.681913606763769 | |||
|entrez_gene_id=3195 | |entrez_gene_id=3195 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TLX1_f1~TLX1_f2 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:TLX1_f1~TLX1_f2 | ||
|name= | |name=non-redundant103 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=TLX1_f1 | |representative_motif_id=TLX1_f1 | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant103
- db :HOCOMOCO
- Id :TLX1_f1
- name :
- score :0.11879291501353552
- External refs:
- Internal refs:
| Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
