NonredundantMotifs:80: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=3664
|motif_cluster_2013_march_motif_members= /UNIPROBE:Irf5_secondary;SCI09~Irf6_secondary;SCI09~Irf4_secondary;SCI09
|name=known80
|repres...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.326255419392637;0.256976141968317;0.231004731256006;0.18576370738304!2;0.145620716852147;0.315488674502416;0.266193010026159;0.272697598619279!3;0.138750375709297;0.396936861960182;0.20518531279273;0.259127449537791!4;0.534193719115474;0.121487574560679;0.0841784394711985;0.260140266852648!5;0.201823472676828;0.589398091826309;0.0866242413853179;0.122154194111544!6;0.0314280283473351;0.0232209417162063;0.0660482615565385;0.87930276837992!7;0.0223888814779034;0.889379236498264;0.0491650985364422;0.0390667834873908!8;0.0422522944665254;0.2959825836559;0.0852342756294989;0.576530846248076!9;0.0229050226216595;0.915186963772835;0.0215694718872452;0.0403385417182599!10;0.117305284418352;0.0610518753728793;0.716357750096008;0.105285090112761!11;0.205872863429051;0.113582221923096;0.609302718964143;0.0712421956837101!12;0.110208126831942;0.0849066775376228;0.274227634643182;0.530657560987254!13;0.233549707336184;0.385054915572194;0.150707969064777;0.230687408026845!14;0.333805656354403;0.136130920608261;0.311600157934336;0.218463265103!15;0.216422765895703;0.309360924410285;0.281144528245146;0.193071781448866 | |||
|entrez_gene_id=3664 | |entrez_gene_id=3664 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE: | |motif_cluster_2013_march_motif_members= /UNIPROBE:Irf4_secondary;SCI09~Irf6_secondary;SCI09~Irf5_secondary;SCI09 | ||
|name= | |name=non-redundant80 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Irf6_secondary | |representative_motif_id=Irf6_secondary | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant80
- db :UNIPROBE
- Id :Irf6_secondary
- name :SCI09
- score :1.5904861099164564
- External refs:
- Internal refs:
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Sub Motif Members
