NonredundantMotifs:71

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant71
• db :UNIPROBE
• Id :Sox8_secondary
• name :SCI09
• score :0.05328855367929437
  
• External refs:

EntrezGene:30812
UniProt:30812

• Internal refs:

EntrezGene:30812

Motif matrix

P0 A C G T 1 0.411937175299342 0.172671332736327 0.20587195038275 0.20951954158158 2 0.171108520940362 0.496660326437858 0.132111221488979 0.200119931132801 3 0.848636810350877 0.0383383199445882 0.0186551802489098 0.0943696894556253 4 0.0227104857920406 0.0278851650629296 0.0322935833138911 0.917110765831139 5 0.0345381923219609 0.0176162763662484 0.0221841164924794 0.925661414819311 6 0.0600211034051851 0.807533941075992 0.0297263562300359 0.102718599288788 7 0.910428780576831 0.0164506223437565 0.0628620409040661 0.0102585561753462 8 0.0499703351708143 0.117801350939192 0.164018783488577 0.668209530401417 9 0.232806925711358 0.0932634390622581 0.568720072973861 0.105209562252523 10 0.417735041843669 0.187636202838869 0.16011482986719 0.234513925450272 11 0.264283831633299 0.335680358499784 0.203995050578312 0.196040759288605 12 0.524448839037564 0.203844472609763 0.113371061958023 0.158335626394649 13 0.196319785493594 0.287667372065113 0.277580504789393 0.2384323376519 14 0.227144161682586 0.276267396423563 0.368394372569987 0.128194069323864