NonredundantMotifs:56

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant56
• db :UNIPROBE
• Id :Irx4_2242.3
• name :CELL08
• score :0.06622895318704682
  
• External refs:

EntrezGene:50805
UniProt:50805

• Internal refs:

EntrezGene:50805

Motif matrix

P0 A C G T 1 0.448140902284075 0.0822566840190749 0.141153108368666 0.328449305328185 2 0.354009738798938 0.179239151897562 0.231684421159074 0.235066688144426 3 0.300225965209272 0.196857457322993 0.192402667151399 0.310513910316336 4 0.269191898789798 0.228296397470123 0.25972728567324 0.242784418066838 5 0.325457965318915 0.00873718477050343 0.038497379134656 0.627307470775925 6 0.907257876004096 0.0132014244525994 0.0158752999135587 0.0636653996297463 7 0.010498897169293 0.935216460498987 0.00778361706921477 0.0465010252625051 8 0.897815577262291 0.0013318531385906 0.019141458009047 0.0817111115900716 9 0.0817111115900716 0.019141458009047 0.0013318531385906 0.897815577262291 10 0.0465010252625051 0.00778361706921477 0.935216460498987 0.010498897169293 11 0.0636653996297463 0.0158752999135587 0.0132014244525994 0.907257876004096 12 0.627307470775925 0.038497379134656 0.00873718477050343 0.325457965318915 13 0.563710352209611 0.193341206749883 0.098814902998096 0.144133538042409 14 0.461314426454503 0.0791247916307484 0.155616819860522 0.303943962054227 15 0.513284437858598 0.10843853982028 0.126001560128783 0.25227546219234 16 0.195487053653612 0.320892606318747 0.240954891717435 0.242665448310206 17 0.385007616736654 0.137791187866151 0.149761652407215 0.32743954298998