NonredundantMotifs:56: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=50805
|motif_cluster_2013_march_motif_members= /UNIPROBE:Irx5_2385.1;CELL08~Irx3_2226.1;CELL08~Irx3_0920.1;CELL08~Irx2_0900.3;CELL08~Irx4_2242...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.448140902284075;0.0822566840190749;0.141153108368666;0.328449305328185!2;0.354009738798938;0.179239151897562;0.231684421159074;0.235066688144426!3;0.300225965209272;0.196857457322993;0.192402667151399;0.310513910316336!4;0.269191898789798;0.228296397470123;0.25972728567324;0.242784418066838!5;0.325457965318915;0.00873718477050343;0.038497379134656;0.627307470775925!6;0.907257876004096;0.0132014244525994;0.0158752999135587;0.0636653996297463!7;0.010498897169293;0.935216460498987;0.00778361706921477;0.0465010252625051!8;0.897815577262291;0.0013318531385906;0.019141458009047;0.0817111115900716!9;0.0817111115900716;0.019141458009047;0.0013318531385906;0.897815577262291!10;0.0465010252625051;0.00778361706921477;0.935216460498987;0.010498897169293!11;0.0636653996297463;0.0158752999135587;0.0132014244525994;0.907257876004096!12;0.627307470775925;0.038497379134656;0.00873718477050343;0.325457965318915!13;0.563710352209611;0.193341206749883;0.098814902998096;0.144133538042409!14;0.461314426454503;0.0791247916307484;0.155616819860522;0.303943962054227!15;0.513284437858598;0.10843853982028;0.126001560128783;0.25227546219234!16;0.195487053653612;0.320892606318747;0.240954891717435;0.242665448310206!17;0.385007616736654;0.137791187866151;0.149761652407215;0.32743954298998 | |||
|entrez_gene_id=50805 | |entrez_gene_id=50805 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE: | |motif_cluster_2013_march_motif_members= /UNIPROBE:Irx3_2226.1;CELL08~Irx3_0920.1;CELL08~Irx2_0900.3;CELL08~Irx6_2623.2;CELL08~Irx4_2242.3;CELL08~Irx5_2385.1;CELL08 | ||
|name= | |name=non-redundant56 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
|representative_motif_id=Irx4_2242.3 | |representative_motif_id=Irx4_2242.3 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:21, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant56
- db :UNIPROBE
- Id :Irx4_2242.3
- name :CELL08
- score :0.06622895318704682
- External refs:
- Internal refs:
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Sub Motif Members
