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NonredundantMotifs:37: Difference between revisions

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Latest revision as of 10:21, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant37
  • db :SWISSREGULON
  • Id :NFE2L1.p2
  • name :NFE2L1
  • score :0.551767084385364
  • External refs:
EntrezGene:NFE2L1
UniProt:NFE2L1

  • Internal refs:
EntrezGene:NFE2L1


Motif matrix
POACGT
1113.962554227.411809316.63265099999948.177515
2680.587961025.5965680
3000706.184529
400705.5087120.675817
5706.184529000
60629.003408077.181121

Sub Motif Members