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Revision as of 09:50, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant195
  • db :UNIPROBE
  • Id :Zfp105_secondary
  • name :SCI09
  • score :0.03069763524205433
  • External refs:
EntrezGene:7584
UniProt:7584

  • Internal refs:
EntrezGene:7584


Motif matrix
P0ACGT
10.2666781481341190.2107925418679240.2703571704185280.25217213957943
20.06051325969006690.3873877093304580.1399398338766080.412159197102868
30.1298348607712140.09466862394308610.581455101841020.194041413444679
40.2228911788199810.2165179857129060.3743892891341230.18620154633299
50.05147020729528360.1831727247521040.2612637895937820.504093278358831
60.03329514519515450.09862252078035860.07521840485981140.792863929164676
70.1592219671326790.757734353022250.0662128685611580.0168308112839137
80.9096194375774130.04157686625526990.03071627971073620.0180874164565811
90.7908968665335910.1393697681791540.04420268655632460.0255306787309305
100.01654948270346530.1218378750337670.1114342401569030.750178402105865
110.7479071638342260.0431468434611010.1791064792510630.0298395134536093
120.6969170691498320.09975027332161830.09831589479609550.105016762732454
130.1322056319922450.2707407172339560.2328955983909630.364158052382836
140.1408091118332110.1322287882155960.1649330061236560.562029093827537
150.05482190465060890.3137798028832910.1797547673181290.451643525147971
160.1444020195693680.1391433129571590.2552831836843970.461171483789076
170.2632190580418960.1609565733273980.3824457364521860.193378632178519

Sub Motif Members