NonredundantMotifs:176

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant176
• db :UNIPROBE
• Id :Rxra_secondary
• name :SCI09
• score :0.08144571495436231
  
• External refs:

EntrezGene:6256
UniProt:6256

• Internal refs:

EntrezGene:6256

Motif matrix

P0 A C G T 1 0.133673581917057 0.10472167117878 0.363655793250918 0.397948953653245 2 0.21884050636365 0.51919974685335 0.185427019465417 0.0765327273175827 3 0.31116502933431 0.163749217862594 0.384672200641104 0.140413552161992 4 0.19919990733853 0.508034168535672 0.137738935271092 0.155026988854706 5 0.395481139303687 0.0621930406418164 0.49491910714159 0.047406712912906 6 0.468210712437548 0.061425501261909 0.00862283648886248 0.46174094981168 7 0.76782747068695 0.0576191077265154 0.0105324514030254 0.164020970183509 8 0.148074771065733 0.0382500059969579 0.756948647421075 0.0567265755162336 9 0.0534072981182964 0.0644839786191506 0.526799340318224 0.355309382944329 10 0.0680458196800297 0.098126684574823 0.190531299516 0.643296196229147 11 0.0957891665213724 0.319999491809967 0.144123383281528 0.440087958387132 12 0.40423450586475 0.072415407520349 0.470869502210853 0.0524805844040487 13 0.211426908626237 0.236889421229062 0.2148788874495 0.336804782695201 14 0.347987897445284 0.155743864476922 0.210009361473537 0.286258876604257 15 0.283002699098381 0.356931233018161 0.160907572857327 0.199158495026131 16 0.223166582688971 0.181231538769926 0.286858744579248 0.308743133961855