NonredundantMotifs:80

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant80
• db :UNIPROBE
• Id :Irf6_secondary
• name :SCI09
• score :1.5904861099164564
  
• External refs:

EntrezGene:3664
UniProt:3664

• Internal refs:

EntrezGene:3664

Motif matrix

P0 A C G T 1 0.326255419392637 0.256976141968317 0.231004731256006 0.18576370738304 2 0.145620716852147 0.315488674502416 0.266193010026159 0.272697598619279 3 0.138750375709297 0.396936861960182 0.20518531279273 0.259127449537791 4 0.534193719115474 0.121487574560679 0.0841784394711985 0.260140266852648 5 0.201823472676828 0.589398091826309 0.0866242413853179 0.122154194111544 6 0.0314280283473351 0.0232209417162063 0.0660482615565385 0.87930276837992 7 0.0223888814779034 0.889379236498264 0.0491650985364422 0.0390667834873908 8 0.0422522944665254 0.2959825836559 0.0852342756294989 0.576530846248076 9 0.0229050226216595 0.915186963772835 0.0215694718872452 0.0403385417182599 10 0.117305284418352 0.0610518753728793 0.716357750096008 0.105285090112761 11 0.205872863429051 0.113582221923096 0.609302718964143 0.0712421956837101 12 0.110208126831942 0.0849066775376228 0.274227634643182 0.530657560987254 13 0.233549707336184 0.385054915572194 0.150707969064777 0.230687408026845 14 0.333805656354403 0.136130920608261 0.311600157934336 0.218463265103 15 0.216422765895703 0.309360924410285 0.281144528245146 0.193071781448866