Template:Known motif

Representative Motif

<br>Analyst: Ivan Kulakovskiy <br>Date: May 2013Collection Name: non-redundantAnalysis information: Analyst: Ivan Kulakovskiy, Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon 208 clusters of known motifs were produced by MACRO-APE(http://autosome.ru/macroape/) using the general phase1 motif clustering procedure applied forknown motif collections.<br>207 of 208 clusters had at least one member passing motif-promotercorrelation procedure. For these clusters representative motifs were selected based on motif-promoter correlation values. For each cluster only motifs with an average distance to other members not greater than mean+SD were considered as representatives.

• Name  :{{{name}}}
• db  :{{{representative_motif_db}}}
• Id  :{{{representative_motif_id}}}
• name  :{{{representative_motif_name}}}
• score  :{{{score}}}
• Entry name : {{{uniprot_entry_name}}}
• Entrez GeneID :{{{entrez_gene_id}}}

Motif matrix
{{{PWM}}}