NonredundantMotifs:78: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;3.377641;62.927784;18.612608;12.588277!2;14.599347;0;82.906963;0!3;5.88782;13.557328;73.694095;4.367067!4;38.093137;0.784521;58.628652;0!5;9.89296;3.843904;73.947532;9.821914!6;7.4308;2.511621;87.563889;0!7;0;94.061908;0;3.444402!8;0;0;96.706125;0.800185!9;0;84.978433;1.709683;10.818194!10;9.391593;0;87.358679;0.756038!11;0;95.823434;0;1.682876!12;47.441587;0.925912;6.683325;42.455486!13;3.286066;44.742118;25.045072;24.433054 | |PWM=P0;A;C;G;T!1;3.377641;62.927784;18.612608;12.588277!2;14.599347;0;82.906963;0!3;5.88782;13.557328;73.694095;4.367067!4;38.093137;0.784521;58.628652;0!5;9.89296;3.843904;73.947532;9.821914!6;7.4308;2.511621;87.563889;0!7;0;94.061908;0;3.444402!8;0;0;96.706125;0.800185!9;0;84.978433;1.709683;10.818194!10;9.391593;0;87.358679;0.756038!11;0;95.823434;0;1.682876!12;47.441587;0.925912;6.683325;42.455486!13;3.286066;44.742118;25.045072;24.433054 | ||
|entrez_gene_id= | |entrez_gene_id=ZFP161 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:ZFP161.p2 /UNIPROBE:E2F2_primary;SCI09~Zfp161_primary;SCI09~E2F3_primary;SCI09 | |motif_cluster_2013_march_motif_members= /SWISSREGULON:ZFP161.p2 /UNIPROBE:E2F2_primary;SCI09~Zfp161_primary;SCI09~E2F3_primary;SCI09 | ||
|name=known78 | |name=known78 | ||
|representative_motif_db=SWISSREGULON | |representative_motif_db=SWISSREGULON | ||
|representative_motif_id=ZFP161.p2 | |representative_motif_id=ZFP161.p2 | ||
|representative_motif_name= | |representative_motif_name=ZFP161 | ||
|score=2.4106925115858346 | |score=2.4106925115858346 | ||
|uniprot_entry_name= | |uniprot_entry_name=ZFP161 | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
Revision as of 12:09, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known78
- db :SWISSREGULON
- Id :ZFP161.p2
- name :ZFP161
- score :2.4106925115858346
- External refs:
- Internal refs:
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Sub Motif Members
