NonredundantMotifs:189: Difference between revisions
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|entrez_gene_id=326
|motif_cluster_2013_march_motif_members= /HOCOMOCO:AIRE_f2
|name=known189
|representative_motif_db=HOCOMOCO
|representative_motif_id=AI...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;16.428571428571484;10.795918367346953;5.1632653061224625;8.918367346938803!2;7.51020408163268;7.51020408163268;5.632653061224489;20.65306122448985!3;5.632653061224489;5.632653061224489;8.448979591836776;21.591836734693906!4;1.877551020408166;0.0;36.612244897959265;2.8163265306122534!5;0.0;0.0;33.79591836734698;7.51020408163268!6;13.14285714285717;1.877551020408166;0.938775510204083;25.346938775510242!7;15.959183673469415;3.755102040816336;0.938775510204083;20.65306122448985!8;15.02040816326536;5.632653061224489;5.632653061224489;15.02040816326536!9;14.081632653061265;2.8163265306122534;5.632653061224489;18.775510204081698!10;21.591836734693945;3.755102040816336;5.632653061224489;10.326530612244925!11;15.959183673469415;1.877551020408166;2.8163265306122534;20.65306122448985!12;9.38775510204083;5.632653061224489;2.8163265306122534;23.469387755102094!13;0.0;0.938775510204083;36.612244897959265;3.755102040816336!14;0.0;0.0;40.36734693877556;0.938775510204083!15;9.38775510204083;3.755102040816336;10.326530612244925;17.836734693877606!16;2.8163265306122534;7.51020408163268;7.51020408163268;23.469387755102094!17;18.77551020408166;0.938775510204083;6.571428571428585;15.02040816326536!18;16.663265306122497;11.030612244898006;4.45918367346938;9.153061224489816 | |||
|entrez_gene_id=326 | |entrez_gene_id=326 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:AIRE_f2 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:AIRE_f2 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known189
- db :HOCOMOCO
- Id :AIRE_f2
- name :
- score :0.050140673277554296
- External refs:
- Internal refs:
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Sub Motif Members
