NonredundantMotifs:188: Difference between revisions
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|entrez_gene_id=3239
|motif_cluster_2013_march_motif_members= /HOCOMOCO:HXD13_f1
|name=known188
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;2.656521739130441;1.526086956521738;1.526086956521738;7.291304347826083!2;0.0;0.0;1.0173913043478262;11.982608695652166!3;1.0173913043478262;0.0;2.260869565217393;9.721739130434786!4;10.202173913043476;0.2543478260869559;0.2543478260869559;2.289130434782607!5;0.9326086956521737;2.967391304347821;0.2543478260869559;8.845652173913049!6;1.271739130434782;0.2543478260869559;2.967391304347821;8.506521739130427!7;8.393478260869559;1.271739130434782;2.402173913043476;0.9326086956521737!8;0.2543478260869559;0.9326086956521737;8.28043478260869;3.5326086956521787!9;5.765217391304345;0.0;6.217391304347821;1.0173913043478262!10;0.0;0.0;11.304347826086952;1.6956521739130481!11;8.647826086956524;2.204347826086952;0.5086956521739131;1.6391304347826072 | |||
|entrez_gene_id=3239 | |entrez_gene_id=3239 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:HXD13_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:HXD13_f1 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known188
- db :HOCOMOCO
- Id :HXD13_f1
- name :
- score :0.027035027744725406
- External refs:
- Internal refs:
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Sub Motif Members
