NonredundantMotifs:149: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=79842
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09
|name=known149
|representative_motif_db=UNIPROBE
|representa...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.110411824619312;0.519909514021034;0.162398432256492;0.207280229103162!2;0.470593272746797;0.172892953555076;0.115202393954877;0.24131137974325!3;0.467126138277054;0.160175127451526;0.227364951088262;0.145333783183157!4;0.196111555801688;0.169855237391659;0.0790678841213435;0.55496532268531!5;0.198275419299105;0.671393451286589;0.0260938644103051;0.104237265004001!6;0.793464816620591;0.0467387666693891;0.110258102130801;0.0495383145792191!7;0.0582035117988556;0.867548608082331;0.0456031654086224;0.0286447147101911!8;0.0794713707368389;0.0274835406428197;0.025248381983932;0.867796706636409!9;0.0322768253685262;0.0658933420330897;0.827417168317375;0.0744126642810091!10;0.0805529840086598;0.119144495234588;0.585049582322154;0.215252938434598!11;0.105105936764887;0.47020770444739;0.170921157292232;0.253765201495491!12;0.690157798204564;0.0339254316104422;0.171120521012061;0.104796249172932!13;0.299542701020779;0.155890259695591;0.362586184257114;0.181980855026516!14;0.343375180937729;0.213359774439731;0.180067190078401;0.263197854544139!15;0.364819370574454;0.14905290640312;0.181128180120945;0.304999542901481!16;0.247817609028364;0.143948239995835;0.217882074778863;0.390352076196938 | |||
|entrez_gene_id=79842 | |entrez_gene_id=79842 | ||
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known149
- db :UNIPROBE
- Id :Zbtb3_secondary
- name :SCI09
- score :0.06986552910323922
- External refs:
- Internal refs:
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
