NonredundantMotifs:99: Difference between revisions
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|PWM=PO;A;C;G;T!1;150.777426;44.611516;32.472352;130.560797!2;187.054076;97.571089;2.239735;71.557191!3;7.133202;2.617048;0;348.671841!4;1.213245;19.709869;29.801076;307.697901!5;5.21749;344.674792;0;8.529809!6;276.185996;13.988609;2.991762;64.449095!7;34.55509;8.675708;6.585533;307.799131!8;233.719791;13.739452;59.091893;51.064326!9;186.751895;61.34396;3.437396;106.082211!10;148.372995;1.29093;9.184175;198.767362!11;2.435858;61.026678;27.551359;266.601567!12;266.658566;22.301906;63.723678;4.931312!13;59.842112;31.483195;8.371251;257.918904!14;200.493977;35.790009;13.080357;108.251119!15;89.746905;113.31144;22.930034;131.627083!16;164.661626;97.103343;12.78659;83.063903!17;70.065297;144.853788;19.843026;122.853351!18;229.463483;52.751705;6.064243;69.336031 | |||
|entrez_gene_id= | |entrez_gene_id= | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:POU1F1.p2 /UNIPROBE:Mtf1_secondary;SCI09 | |motif_cluster_2013_march_motif_members= /SWISSREGULON:POU1F1.p2 /UNIPROBE:Mtf1_secondary;SCI09 | ||
Revision as of 10:47, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known99
- db :SWISSREGULON
- Id :POU1F1.p2
- name :
- score :0.08897946886078495
- External refs:
- Internal refs:
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Sub Motif Members
