NonredundantMotifs:88: Difference between revisions
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|entrez_gene_id=30827
|motif_cluster_2013_march_motif_members= /JASPAR:MA0133.1;BRCA1 /HOCOMOCO:BRCA1_f1~CXXC1_si
|name=known88
|representative_motif_db=HO...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;5.022996002496011;42.93101199251194;0.5581106669440015;9.487881338048025!2;0.0;0.0;55.02340977629871;2.976590223701342!3;4.087372887317323;5.575667999167995;17.47115155342931;30.86580756008532!4;0.0;0.0;8.552258222869348;49.44774177713065!5;5.209032891477346;0.7441475559253327;36.41972087816525;15.62709867443206!6;2.976590223701342;0.7441475559253327;28.23409776298658;26.045164457386726!7;8.929770671104025;31.210687986687923;2.2324426677760036;15.62709867443206 | |||
|entrez_gene_id=30827 | |entrez_gene_id=30827 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0133.1;BRCA1 /HOCOMOCO:BRCA1_f1~CXXC1_si | |motif_cluster_2013_march_motif_members= /JASPAR:MA0133.1;BRCA1 /HOCOMOCO:BRCA1_f1~CXXC1_si | ||
Revision as of 10:47, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known88
- db :HOCOMOCO
- Id :CXXC1_si
- name :
- score :0.09273821432906415
- External refs:
- Internal refs:
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Sub Motif Members
