NonredundantMotifs:87: Difference between revisions
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|entrez_gene_id=3090
|motif_cluster_2013_march_motif_members= /JASPAR:MA0161.1;NFIC /HOCOMOCO:NFIA+NFIB+NFIC+NFIX_si /UNIPROBE:Hic1_primary;SCI09
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.2752071165809;0.211374939882425;0.250276687437895;0.26314125609878!2;0.135064246282642;0.327571435857793;0.217556292614213;0.319808025245352!3;0.145658589169038;0.242586431078853;0.267178691961949;0.34457628779016!4;0.656519056903772;0.00971214347213005;0.315173854411255;0.0185949452128421!5;0.00226499308241757;0.00475485402566559;0.0016556488560358;0.991324504035881!6;0.0418733705985873;0.00112759896285182;0.955340373987385;0.00165865645117629!7;0.00130551060523905;0.974833528206637;0.0222154754500661;0.00164548573805761!8;0.00197831970448536;0.992066032057098;0.0026384902368037;0.00331715800161292!9;0.921031777705037;0.0723878828148734;0.00123659740789628;0.00534374207219352!10;0.582027364900139;0.211693940233752;0.115736288088923;0.0905424067771862!11;0.00599025897564052;0.927449539126281;0.0283062416107432;0.0382539602873358!12;0.0273740339749871;0.799878575295505;0.0536672800126871;0.119080110716821!13;0.203510085856749;0.191263215579811;0.168997220892226;0.436229477671214!14;0.402252699547531;0.154087334035405;0.291345833237507;0.152314133179557!15;0.20120126991122;0.414412456297076;0.145329799984595;0.239056473807109!16;0.241094098919118;0.332661254970953;0.143464019251261;0.282780626858668 | |||
|entrez_gene_id=3090 | |entrez_gene_id=3090 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0161.1;NFIC /HOCOMOCO:NFIA+NFIB+NFIC+ | |motif_cluster_2013_march_motif_members= /JASPAR:MA0161.1;NFIC /UNIPROBE:Hic1_primary;SCI09 /HOCOMOCO:NFIA+NFIB+NFIC+NFIX_si | ||
|name=known87 | |name=known87 | ||
|representative_motif_db=UNIPROBE | |representative_motif_db=UNIPROBE | ||
Revision as of 10:47, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known87
- db :UNIPROBE
- Id :Hic1_primary
- name :SCI09
- score :0.07041977963654947
- External refs:
- Internal refs:
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Sub Motif Members
