NonredundantMotifs:46: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=PO;A;C;G;T!1;80.141547;11.386141;32.292129;5.977397!2;65.289299;36.040538;15.929712;12.537665!3;48.75651;45.570256;22.3644;13.106048!4;32.674113;91.629378;1.846416;3.647307!5;121.733158;1.440381;3.547723;3.075952!6;61.718327;54.062964;0.626706;13.389217!7;128.652909;0;1.144305;0!8;125.517274;0.861069;1.957989;1.460882!9;20.118294;97.678251;7.615138;4.385531!10;115.635649;11.224357;1.670651;1.266557!11;48.334892;60.541572;1.749115;19.171635!12;84.541195;5.304026;33.96577;5.986223!13;46.981545;39.245274;16.409825;27.16057!14;86.68541;7.667529;21.432122;14.012153 | |||
|entrez_gene_id= | |entrez_gene_id= | ||
|motif_cluster_2013_march_motif_members= | |motif_cluster_2013_march_motif_members= /SWISSREGULON:BPTF.p2 /UNIPROBE:Foxl1_secondary;SCI09~Foxa2_secondary;SCI09~Foxj1_secondary;SCI09~Foxj3_secondary;SCI09~Foxk1_secondary;SCI09 /HOCOMOCO:BPTF_si | ||
|name=known46 | |name=known46 | ||
|representative_motif_db=SWISSREGULON | |representative_motif_db=SWISSREGULON | ||
Revision as of 10:46, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known46
- db :SWISSREGULON
- Id :BPTF.p2
- name :
- score :1.6408128929467176
- External refs:
- Internal refs:
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Sub Motif Members
