Coexpression cluster:C4800: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|tfbs_overrepresentation=0.000598099,0.0586687,0.134243,0.0477154,0.199763,0.0050633,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.0190579,0.125978,0.0116452,0.0619003,0.000522123,0.0982016,0.0528514,0.00606063,0.188635,0.00920475,0.00345589,0.0948982,0.0415721,0.215492,0.0236364,0.00424558,0.143747,0.0933697,4.37092e-06,0.114046,0.000163551,0.0233668,5.16431e-05,0.000107245,0.688181,0.0429682,0.120351,0.0667043,8.23283e-08,0.0246116,0.00051131,0.00120442,0.000323983,0.0362416,0.0380166,0.18151,0.0064353,0.121201,0.154071,0.00149495,0.0701653,0.0929951,0.00153794,0.0384161,0.107455,0.212709,0.00315066,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.0831028,0.00234364,0.089036,0.119383,0.00747605,0.0171177,0.00481292,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.0472875,0.0347684,0.064341,0.209032,0.241734,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.21992,9.36604e-07,0.0927458,0.0415725,0.0574857,0.276221,0.141874,0.0370665,0.00209623,0.0409286,0.0669887,0.338096,0.0109386,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.005305,0.0337525,0.0203386,0.00163609,0.139021,0.0838393,0.00088228,0.0249033,0.000512275,0.00378931,0.00542817,0.00106363,0.00424238,0.0147934,0.00366285,0.134932,0.0595773,0.0028727,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.013844,5.85505e-05,0.0988228,0.0842275,0.000768271,0.120833,0.200647,0.143677,0.180712,0.0265818,1.34131e-05,0.00719677,0.0747594,0.228385,0.0516985,0.0337251,0.0281563,0.0952829,0.116642,0.000604898,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.00051468,0.0176328,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.0187509,0.122935,0.00240885,0.112671,0.0470731,0.0782523,3.82446e-05,0.00234165,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.00173038,0.178359,0.0458667,0.104357,0.121154,0.1129,0.000610418,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,3.44213e-05,0.0738599,0.126611,0.000497929,0.085973,0.060453,0.059896,0.0108418,0.384785,0.0418404,0.00300396,0.000158474,0.0931946,0.0472272,0.00377835,0.014161,0.0249262,5.84613e-05,0.00100585,0.000171422,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.0133783,0.185164,6.30542e-05,0.0980288,0.0980899,3.3218e-05,0.107242,0.0219021,0.0024791,0.582402,0.0619218,0.0163125,0.000828043,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.00453939,0.063292,0.003405,0.119261,0.0865903,0.0380459,0.00886625,0.584917,0.355018,0.782949,0.268011,0.0101922,0.517782,0.807281,6.76379e-05,0.0185583,0.261553,0.446302,0.0120704,0.309233,0.147559,0.00800846,0.0146881,0.329568,0.53472,0.0164332,0.271958,0.00531795,0.0159894,0.39729,0.217139,0.0643874,0.00127255,0.0756284,0.0176124,0.00249167,0.109988,0.330894,0.218329,0.107929,0.0124294,0.129235,0.280025,0.528324,0.00682286,0.0117562,0.415647,0.142924,0.0352744,0.0424424,0.0509673,0.00462582,0.00695027,0.0270783,0.00078363,0.0669244,0.283727,0.00679651,0.577664,0.291709,0.120054,0.212757,0.000243171,0.292835,0.137839,0.0210941,0.0807167,0.0116572,0.241757,0.18237,0.706298,0.513427,0.161148,0.275351,0.000178104,0.185661,0.0684159,0.0427964,0.0405716,0.625945,0.503058,0.163222,0.169228,0.0338468,0.281576,0.0271848,0.163244,0.00229986,0.0730934,0.184794,0.0641718,0.762864,0.0583074,0.1002,0.305671,0.188159,0.191921,0.448039,0.218623,0.0550136,0.117923,0.0451077,0.0747529,0.229003,0.650179,0.061213,0.154921,3.2354e-05,0.0671437,0.138202,0.00514398,0.327108,0.683186,0.278044,0.229008,0.0193295,7.81695e-06,0.0642385,0.0209597,0.15631,0.0530502,0.00242214,0.0293525,0.00239933,0.00654277,0.858756,0.335105,6.85353e-07,0.0005766,0.385517,0.0123475,0.0224279,0.127215,0.252232,0.0122989,0.0465712,0.00985947,0.000266053,0.134788,0.0985856,0.18767,0.00541072,0.00488039,0.00911104,0.0526965,0.00617767,0.00257275,0.155572,0.169823,0.284629,0.0379506,0.0741332,0.226257,0.405955,0.41707,0.363685,0.130283,0.40841,0.00172833,0.525396,0.651524,0.113671,0.040018,0.339277,0.0479524,0.00470507,0.141758,0.455379,0.520495,0.000769722,0.00275523,0.0799758,0.232251,0.00132186,0.0891382,0.0595618,0.524997,0.0178839,0.00943126,0.0081614,0.0699395,5.74742e-05,0.404569,0.00403911,0.0186811,0.316179,0.0697683,0.00157993,0.192544,0.0779981,3.32302e-05,0.000561685,0.0270501,0.00166084,0.00307017,0.441735,0.0196924,0.00651205,0.046606,0.0435386,0.303336,0.126478,0.000454603,0.10689,0.273326,0.0627924,0.0842821,0.0179103,0.0517437,0.0434097,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.00184145,7.53678e-05,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,9.13558e-09,0.062811,0.19559,0.132201,0.188694,0.0481795,0.0214786,0.0966069,0.127758,4.98866e-05,0.184486,0.000924948,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.000110141,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.0123828,0.0797897,0.0974211,0.000777797,0.123526,0.0906475,0.0558058,0.000389382,8.35469e-08,0.009894,0.0145999,0.0656973,0.211746,0.026334,0.0801488,0.0757897,0.000803238,0.00140535,0.0549034,0.0779715,4.44781e-07,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.0117175,0.0330727,0.0694567,0.219556,0.0394698,0.0596469,0.419264,0.000337112,0.108872,0.11002,0.0376172,0.0286025,0.549354,0.000564671,0.038848,0.00394051,0.0550279,0.0109154,0.0353101,0.217069,0.190048,0.131088,0.090504,0.0027004,0.00501606,0.0761239,0.000982125,0.0818785,0.182701,0.00836526,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.00502301,0.0473033,0.094881,0.022113,0.132886,0.00307881,0.109194,0.128564,0.00904548,0.687347,0.120459,0.051838,0.0993999,0.0500365,0.00195207,0.0755121,0.0936516,6.67232e-07,0.0340203,0.0741807,0.0425274,0.739716,0.288159,0.000123443,0.289306,0.000310064,0.0198413,0.177967,0.00136406,0.057571,0.047591,0.0899568,0.0608699,0.0163547,0.0505407,0.0713214,0.223874,0.0472142,0.0355833,0.125606,0.175094,0.43617,0.519327,0.206454,0.218192,0.00608582,0.0673484,0.108748,0.0494066,0.0958493,9.76135e-05,0.0755808,0.045654,0.110216,0.070276,0.0277579,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.0266106,0.057168,0.00259914,0.0759837,0.286863,0.152372,0.0203723,0.218271,0.101607,0.327067,1.49838e-09,0.00886538,0.0121199,0.0626744,0.191335,0.0116284,0.0058211,0.155821,0.0718905,0.0919008,0.0602373,0.0109522,0.15063,0.00490354,0.0126914,0.170295,0.193653,0.137219,0.228144,0.000232851,1.59953e-06,0.000308572,0.0838874,0.331451,0.113145,0.00659775,0.0186145,0.01625,0.00464715,0.264079,0.0339656,0.140533,0.0997756,0.0364628,0.00556936,0.113069,0.025556,4.10812e-05,0.09066,0.585505,0.0147868,0.0190329,9.56941e-05,0.184948,0.156261,0.0065917,0.511859,0.0590944,0.0334734,0.178389,0.218229,0.0290303,0.0972686,0.0743925,0.0360851,0.0168763,0.00899487,0.0434602,0.133616,0.103051,0.36927,0.000383016,0.0973145,0.00249898,0.544776,0.43956,0.0789454,0.10748,0.022688,0.00150618,0.00182638,0.36145,0.0966095,0.0129,0.057779,0.643768,0.11074,0.366326,0.390366,0.0305485,0.153829,0.0217093,0.522904,0.3468,0.336835,0.227104,0.0380245,0.0734371,0.0867545,0.284625,0.504757,0.55194,0.144318,0.0465139,0.164197,0.128922,0.287881,0.574635,0.0283889,0.000849258,0.468444,0.258219,0.446557,0.243383,0.191695,0.390974,0.382874,0.683217,0.161598,0.751174,0.0868402,0.496032,0.476802,0.0120582,0.200632,0.477353,0.452741,0.399222,0.43491,0.20342,0.200493,0.20558,0.0505073,0.25656,0.0189087,0.349197,0.383291,0.156104,0.0104921,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.20075,0.314429,0.181415,0.282286,0.78,0.00305733,0.408413,0.00654592,0.322213,0.0931134,0.33942,0.00285083,0.0871388,0.00694606,0.802166,0.537348,0.222037,0.416621,0.416292,0.0252635,0.148994,0.579431,0.204817,0.00340294,0.0101228,0.103502,0.000885521,0.00151457,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.170369,0.0164118,0.365487,0.534741,0.0889149,0.363192,0.236011,0.203486,0.273398,0.0816179,0.4466,0.00103348,0.00438156,0.637444,0.0524515,0.0317395,0.371414,0.0527347,0.303709,0.15059,0.386538,0.508064,0.0345164,0.383276,0.457886,0.000798597,0.220231,0.0355483,0.196976,0.191517,0.129584,0.0663581,0.307334,0.00367772,0.0048173,0.0517073,0.135386,0.0932845,0.000335597,0.368095,0.275089,2.66924e-09,0.138622,0.00114842,0.339729,0.197805,0.608187,0.387069,0.0627969,0.52832,0.299887,0.266492,0.205413,0.17639,0.00311629,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.00386277,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.00469907,3.92648e-05,0.252184,0.012591,0.0358457,0.20753,0.119514,0.0171537,0.193601,0.220904,0.000138062,5.18926e-06,0.310674,0.000125265,0.198614,0.00126297,0.123324,0.0213665,0.0325925,0.00449563,0.00803363,0.179889,0.226869,0.00455899,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.00394192,0.113092,0.145701,3.48299e-07,0.162145,0.228955,0.0151141,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.0251995,0.158479,0.0262794,0.0204324,0.00805527,0.00361981,0.30793,0.180606,0.0135229,0.0363723,0.0119784,0.00203642,0.00801612,0.00121059,0.185335,0.0723291,0.0367308,0.261744,0.203781,0.0246892,0.0232077,0.141867,0.00140109,0.249101,0.115972,0.224568,0.246105,4.66494e-05,0.0215816,0.139785,0.0208458,0.00282612,0.156465,0.13108,0.256963,0.222798,0.172134,0.00106131,0.0969345,0.202137,0.000591588,0.280943,0.00206803,0.0822373,0.0219487,0.106739,0.0536053,0.0537737,2.63506e-05,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.0240944,0.018841,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.00168003,0.295769,0.286691,0.00940743,0.0105548,0.263159,0.00345643,0.200105,0.0280973,0.0497481,0.253509,0.177664,0.00482769,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.0304659,0.00756988,0.115817,0.218052,0.0271615,0.00691586,0.194982,0.0195259,0.0440463,0.0445413,0.249955,0.00084829,0.00225856,0.00452173,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.00694911,0.171683,0.158847,0.000324864,0.071111,0.270604,0.101021,6.83423e-06,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435 | |tfbs_overrepresentation=0.000598099,0.0586687,0.134243,0.0477154,0.199763,0.0050633,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.0190579,0.125978,0.0116452,0.0619003,0.000522123,0.0982016,0.0528514,0.00606063,0.188635,0.00920475,0.00345589,0.0948982,0.0415721,0.215492,0.0236364,0.00424558,0.143747,0.0933697,4.37092e-06,0.114046,0.000163551,0.0233668,5.16431e-05,0.000107245,0.688181,0.0429682,0.120351,0.0667043,8.23283e-08,0.0246116,0.00051131,0.00120442,0.000323983,0.0362416,0.0380166,0.18151,0.0064353,0.121201,0.154071,0.00149495,0.0701653,0.0929951,0.00153794,0.0384161,0.107455,0.212709,0.00315066,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.0831028,0.00234364,0.089036,0.119383,0.00747605,0.0171177,0.00481292,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.0472875,0.0347684,0.064341,0.209032,0.241734,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.21992,9.36604e-07,0.0927458,0.0415725,0.0574857,0.276221,0.141874,0.0370665,0.00209623,0.0409286,0.0669887,0.338096,0.0109386,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.005305,0.0337525,0.0203386,0.00163609,0.139021,0.0838393,0.00088228,0.0249033,0.000512275,0.00378931,0.00542817,0.00106363,0.00424238,0.0147934,0.00366285,0.134932,0.0595773,0.0028727,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.013844,5.85505e-05,0.0988228,0.0842275,0.000768271,0.120833,0.200647,0.143677,0.180712,0.0265818,1.34131e-05,0.00719677,0.0747594,0.228385,0.0516985,0.0337251,0.0281563,0.0952829,0.116642,0.000604898,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.00051468,0.0176328,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.0187509,0.122935,0.00240885,0.112671,0.0470731,0.0782523,3.82446e-05,0.00234165,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.00173038,0.178359,0.0458667,0.104357,0.121154,0.1129,0.000610418,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,3.44213e-05,0.0738599,0.126611,0.000497929,0.085973,0.060453,0.059896,0.0108418,0.384785,0.0418404,0.00300396,0.000158474,0.0931946,0.0472272,0.00377835,0.014161,0.0249262,5.84613e-05,0.00100585,0.000171422,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.0133783,0.185164,6.30542e-05,0.0980288,0.0980899,3.3218e-05,0.107242,0.0219021,0.0024791,0.582402,0.0619218,0.0163125,0.000828043,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.00453939,0.063292,0.003405,0.119261,0.0865903,0.0380459,0.00886625,0.584917,0.355018,0.782949,0.268011,0.0101922,0.517782,0.807281,6.76379e-05,0.0185583,0.261553,0.446302,0.0120704,0.309233,0.147559,0.00800846,0.0146881,0.329568,0.53472,0.0164332,0.271958,0.00531795,0.0159894,0.39729,0.217139,0.0643874,0.00127255,0.0756284,0.0176124,0.00249167,0.109988,0.330894,0.218329,0.107929,0.0124294,0.129235,0.280025,0.528324,0.00682286,0.0117562,0.415647,0.142924,0.0352744,0.0424424,0.0509673,0.00462582,0.00695027,0.0270783,0.00078363,0.0669244,0.283727,0.00679651,0.577664,0.291709,0.120054,0.212757,0.000243171,0.292835,0.137839,0.0210941,0.0807167,0.0116572,0.241757,0.18237,0.706298,0.513427,0.161148,0.275351,0.000178104,0.185661,0.0684159,0.0427964,0.0405716,0.625945,0.503058,0.163222,0.169228,0.0338468,0.281576,0.0271848,0.163244,0.00229986,0.0730934,0.184794,0.0641718,0.762864,0.0583074,0.1002,0.305671,0.188159,0.191921,0.448039,0.218623,0.0550136,0.117923,0.0451077,0.0747529,0.229003,0.650179,0.061213,0.154921,3.2354e-05,0.0671437,0.138202,0.00514398,0.327108,0.683186,0.278044,0.229008,0.0193295,7.81695e-06,0.0642385,0.0209597,0.15631,0.0530502,0.00242214,0.0293525,0.00239933,0.00654277,0.858756,0.335105,6.85353e-07,0.0005766,0.385517,0.0123475,0.0224279,0.127215,0.252232,0.0122989,0.0465712,0.00985947,0.000266053,0.134788,0.0985856,0.18767,0.00541072,0.00488039,0.00911104,0.0526965,0.00617767,0.00257275,0.155572,0.169823,0.284629,0.0379506,0.0741332,0.226257,0.405955,0.41707,0.363685,0.130283,0.40841,0.00172833,0.525396,0.651524,0.113671,0.040018,0.339277,0.0479524,0.00470507,0.141758,0.455379,0.520495,0.000769722,0.00275523,0.0799758,0.232251,0.00132186,0.0891382,0.0595618,0.524997,0.0178839,0.00943126,0.0081614,0.0699395,5.74742e-05,0.404569,0.00403911,0.0186811,0.316179,0.0697683,0.00157993,0.192544,0.0779981,3.32302e-05,0.000561685,0.0270501,0.00166084,0.00307017,0.441735,0.0196924,0.00651205,0.046606,0.0435386,0.303336,0.126478,0.000454603,0.10689,0.273326,0.0627924,0.0842821,0.0179103,0.0517437,0.0434097,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.00184145,7.53678e-05,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,9.13558e-09,0.062811,0.19559,0.132201,0.188694,0.0481795,0.0214786,0.0966069,0.127758,4.98866e-05,0.184486,0.000924948,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.000110141,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.0123828,0.0797897,0.0974211,0.000777797,0.123526,0.0906475,0.0558058,0.000389382,8.35469e-08,0.009894,0.0145999,0.0656973,0.211746,0.026334,0.0801488,0.0757897,0.000803238,0.00140535,0.0549034,0.0779715,4.44781e-07,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.0117175,0.0330727,0.0694567,0.219556,0.0394698,0.0596469,0.419264,0.000337112,0.108872,0.11002,0.0376172,0.0286025,0.549354,0.000564671,0.038848,0.00394051,0.0550279,0.0109154,0.0353101,0.217069,0.190048,0.131088,0.090504,0.0027004,0.00501606,0.0761239,0.000982125,0.0818785,0.182701,0.00836526,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.00502301,0.0473033,0.094881,0.022113,0.132886,0.00307881,0.109194,0.128564,0.00904548,0.687347,0.120459,0.051838,0.0993999,0.0500365,0.00195207,0.0755121,0.0936516,6.67232e-07,0.0340203,0.0741807,0.0425274,0.739716,0.288159,0.000123443,0.289306,0.000310064,0.0198413,0.177967,0.00136406,0.057571,0.047591,0.0899568,0.0608699,0.0163547,0.0505407,0.0713214,0.223874,0.0472142,0.0355833,0.125606,0.175094,0.43617,0.519327,0.206454,0.218192,0.00608582,0.0673484,0.108748,0.0494066,0.0958493,9.76135e-05,0.0755808,0.045654,0.110216,0.070276,0.0277579,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.0266106,0.057168,0.00259914,0.0759837,0.286863,0.152372,0.0203723,0.218271,0.101607,0.327067,1.49838e-09,0.00886538,0.0121199,0.0626744,0.191335,0.0116284,0.0058211,0.155821,0.0718905,0.0919008,0.0602373,0.0109522,0.15063,0.00490354,0.0126914,0.170295,0.193653,0.137219,0.228144,0.000232851,1.59953e-06,0.000308572,0.0838874,0.331451,0.113145,0.00659775,0.0186145,0.01625,0.00464715,0.264079,0.0339656,0.140533,0.0997756,0.0364628,0.00556936,0.113069,0.025556,4.10812e-05,0.09066,0.585505,0.0147868,0.0190329,9.56941e-05,0.184948,0.156261,0.0065917,0.511859,0.0590944,0.0334734,0.178389,0.218229,0.0290303,0.0972686,0.0743925,0.0360851,0.0168763,0.00899487,0.0434602,0.133616,0.103051,0.36927,0.000383016,0.0973145,0.00249898,0.544776,0.43956,0.0789454,0.10748,0.022688,0.00150618,0.00182638,0.36145,0.0966095,0.0129,0.057779,0.643768,0.11074,0.366326,0.390366,0.0305485,0.153829,0.0217093,0.522904,0.3468,0.336835,0.227104,0.0380245,0.0734371,0.0867545,0.284625,0.504757,0.55194,0.144318,0.0465139,0.164197,0.128922,0.287881,0.574635,0.0283889,0.000849258,0.468444,0.258219,0.446557,0.243383,0.191695,0.390974,0.382874,0.683217,0.161598,0.751174,0.0868402,0.496032,0.476802,0.0120582,0.200632,0.477353,0.452741,0.399222,0.43491,0.20342,0.200493,0.20558,0.0505073,0.25656,0.0189087,0.349197,0.383291,0.156104,0.0104921,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.20075,0.314429,0.181415,0.282286,0.78,0.00305733,0.408413,0.00654592,0.322213,0.0931134,0.33942,0.00285083,0.0871388,0.00694606,0.802166,0.537348,0.222037,0.416621,0.416292,0.0252635,0.148994,0.579431,0.204817,0.00340294,0.0101228,0.103502,0.000885521,0.00151457,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.170369,0.0164118,0.365487,0.534741,0.0889149,0.363192,0.236011,0.203486,0.273398,0.0816179,0.4466,0.00103348,0.00438156,0.637444,0.0524515,0.0317395,0.371414,0.0527347,0.303709,0.15059,0.386538,0.508064,0.0345164,0.383276,0.457886,0.000798597,0.220231,0.0355483,0.196976,0.191517,0.129584,0.0663581,0.307334,0.00367772,0.0048173,0.0517073,0.135386,0.0932845,0.000335597,0.368095,0.275089,2.66924e-09,0.138622,0.00114842,0.339729,0.197805,0.608187,0.387069,0.0627969,0.52832,0.299887,0.266492,0.205413,0.17639,0.00311629,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.00386277,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.00469907,3.92648e-05,0.252184,0.012591,0.0358457,0.20753,0.119514,0.0171537,0.193601,0.220904,0.000138062,5.18926e-06,0.310674,0.000125265,0.198614,0.00126297,0.123324,0.0213665,0.0325925,0.00449563,0.00803363,0.179889,0.226869,0.00455899,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.00394192,0.113092,0.145701,3.48299e-07,0.162145,0.228955,0.0151141,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.0251995,0.158479,0.0262794,0.0204324,0.00805527,0.00361981,0.30793,0.180606,0.0135229,0.0363723,0.0119784,0.00203642,0.00801612,0.00121059,0.185335,0.0723291,0.0367308,0.261744,0.203781,0.0246892,0.0232077,0.141867,0.00140109,0.249101,0.115972,0.224568,0.246105,4.66494e-05,0.0215816,0.139785,0.0208458,0.00282612,0.156465,0.13108,0.256963,0.222798,0.172134,0.00106131,0.0969345,0.202137,0.000591588,0.280943,0.00206803,0.0822373,0.0219487,0.106739,0.0536053,0.0537737,2.63506e-05,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.0240944,0.018841,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.00168003,0.295769,0.286691,0.00940743,0.0105548,0.263159,0.00345643,0.200105,0.0280973,0.0497481,0.253509,0.177664,0.00482769,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.0304659,0.00756988,0.115817,0.218052,0.0271615,0.00691586,0.194982,0.0195259,0.0440463,0.0445413,0.249955,0.00084829,0.00225856,0.00452173,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.00694911,0.171683,0.158847,0.000324864,0.071111,0.270604,0.101021,6.83423e-06,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435 | ||
|tfbs_overrepresentation_for_novel_motifs=0.699513,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.221898,0.820209,0.985163,1.11328,2.13378,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,1.65118,0.242883,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,0.439574,1.46099,0.427404,0.596053,1.99037,0.567465,0.469078,0.598234,0.777097,0.259059,0.63803,0.151453,0.726632,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,2.06667,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,2.20718,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,0.333216,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,1.16162,1.14559,0.960908,2.15606,1.39759,0.169933,0.303648,0.993996,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,2.40384,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,0.188952,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,2.29164,1.54007,0.250511,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,1.69998,1.11698,0.960047,0.524529,0.936473,1.42224 | |tfbs_overrepresentation_for_novel_motifs=0.699513,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.221898,0.820209,0.985163,1.11328,2.13378,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,1.65118,0.242883,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,0.439574,1.46099,0.427404,0.596053,1.99037,0.567465,0.469078,0.598234,0.777097,0.259059,0.63803,0.151453,0.726632,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,2.06667,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,2.20718,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,0.333216,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,1.16162,1.14559,0.960908,2.15606,1.39759,0.169933,0.303648,0.993996,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,2.40384,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,0.188952,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,2.29164,1.54007,0.250511,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,1.69998,1.11698,0.960047,0.524529,0.936473,1.42224 | ||
|tfbs_overrepresentation_jaspar=MA0003.1;0.0471418,MA0004.1;1.93041,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;0.377374,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.557638,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;1.23283,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.0834661,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;1.55117,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.273764,MA0146.1;0.348055,MA0147.1;3.48176,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;0.195278,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;3.15214,MA0047.2;0.973066,MA0112.2;1.34467,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;0.256269,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.455568,MA0163.1;0.122425,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.0373086,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;1.40979,MA0442.1;0 | |||
}} | }} |
Revision as of 22:19, 22 January 2013
Full id: C4800_mesenchymal_Prostate_Small_serous_CD14_meningioma_smallcell
Phase1 CAGE Peaks
Hg19::chr9:128000933..128000979,- | p@chr9:128000933..128000979 - |
Hg19::chr9:128002987..128003037,- | p@chr9:128002987..128003037 - |
Hg19::chr9:128003064..128003099,- | p@chr9:128003064..128003099 - |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br><br><br>
Ontology term | p-value | n |
---|---|---|
animal cell | 1.78e-09 | 679 |
eukaryotic cell | 1.78e-09 | 679 |
classical monocyte | 4.29e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.29e-07 | 42 |
defensive cell | 7.02e-07 | 48 |
phagocyte | 7.02e-07 | 48 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.0471418 |
MA0004.1 | 1.93041 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 0.377374 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.341392 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.557638 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 1.23283 |
MA0061.1 | 0.456531 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 0.405474 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 0.0834661 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 0.785956 |
MA0093.1 | 1.55117 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 0.273764 |
MA0146.1 | 0.348055 |
MA0147.1 | 3.48176 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 0.449458 |
MA0035.2 | 0.894194 |
MA0039.2 | 0.195278 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 3.15214 |
MA0047.2 | 0.973066 |
MA0112.2 | 1.34467 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 0.312019 |
MA0155.1 | 0.256269 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 0.455568 |
MA0163.1 | 0.122425 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 0.0373086 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 1.40979 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
SMARCB1#6598 | 2 | 12.1684771874383 | 0.00867500222192174 | 0.033016601328497 |
SMARCC2#6601 | 2 | 62.7702496179317 | 0.000335837541708507 | 0.00341823769793341 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.