FFCP PHASE1:Hg19::chr1:111217541..111217576,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002087!1.65e-42!119;CL:0000738!2.37e-40!140;CL:0002031!4.80e-35!124;CL:0000037!1.89e-32!172;CL:0000566!1.89e-32!172;CL:0000988!9.50e-31!182;CL:0002032!5.58e-29!165;CL:0000837!5.58e-29!165;CL:0000542!4.79e-25!53;CL:0000051!4.79e-25!53;CL:0000838!1.30e-24!52;CL:0002057!6.36e-19!42;CL:0000860!1.55e-16!45;CL:0000084!5.73e-16!25;CL:0000827!5.73e-16!25;CL:0000766!7.94e-16!76;CL:0000791!9.79e-16!18;CL:0000789!9.79e-16!18;CL:0002420!9.79e-16!18;CL:0002419!9.79e-16!18;CL:0000790!9.79e-16!18;CL:0002194!1.80e-15!63;CL:0000576!1.80e-15!63;CL:0000040!1.80e-15!63;CL:0000559!1.80e-15!63;CL:0002009!2.02e-14!65;CL:0000839!4.32e-13!70;CL:0000557!4.62e-13!71;CL:0000625!3.74e-10!11;CL:0000763!6.08e-09!112;CL:0000049!6.08e-09!112;CL:0000236!2.94e-08!14;CL:0000945!3.08e-08!24;CL:0000826!3.08e-08!24 | |ontology_enrichment_celltype=CL:0002087!1.65e-42!119;CL:0000738!2.37e-40!140;CL:0002031!4.80e-35!124;CL:0000037!1.89e-32!172;CL:0000566!1.89e-32!172;CL:0000988!9.50e-31!182;CL:0002032!5.58e-29!165;CL:0000837!5.58e-29!165;CL:0000542!4.79e-25!53;CL:0000051!4.79e-25!53;CL:0000838!1.30e-24!52;CL:0002057!6.36e-19!42;CL:0000860!1.55e-16!45;CL:0000084!5.73e-16!25;CL:0000827!5.73e-16!25;CL:0000766!7.94e-16!76;CL:0000791!9.79e-16!18;CL:0000789!9.79e-16!18;CL:0002420!9.79e-16!18;CL:0002419!9.79e-16!18;CL:0000790!9.79e-16!18;CL:0002194!1.80e-15!63;CL:0000576!1.80e-15!63;CL:0000040!1.80e-15!63;CL:0000559!1.80e-15!63;CL:0002009!2.02e-14!65;CL:0000839!4.32e-13!70;CL:0000557!4.62e-13!71;CL:0000625!3.74e-10!11;CL:0000763!6.08e-09!112;CL:0000049!6.08e-09!112;CL:0000236!2.94e-08!14;CL:0000945!3.08e-08!24;CL:0000826!3.08e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.01e-19;25!CL:0000860;3.69e-19;33!CL:0002057;3.69e-19;33!CL:0000791;8.10e-19;18!CL:0000789;8.10e-19;18!CL:0002419;8.10e-19;18!CL:0000542;3.66e-17;53!CL:0002087;8.35e-16;104!CL:0000576;3.17e-14;48!CL:0000473;4.38e-13;39!CL:0000234;4.38e-13;39!CL:0000625;4.99e-12;11!CL:0000236;1.11e-09;13!CL:0000738;1.97e-09;136!CL:0000766;1.34e-08;69!CL:0000945;3.05e-08;24!CL:0000624;8.49e-08;6 | |ontology_enrichment_celltype_v019=CL:0000084;3.01e-19;25!CL:0000860;3.69e-19;33!CL:0002057;3.69e-19;33!CL:0000791;8.10e-19;18!CL:0000789;8.10e-19;18!CL:0002419;8.10e-19;18!CL:0000542;3.66e-17;53!CL:0002087;8.35e-16;104!CL:0000576;3.17e-14;48!CL:0000473;4.38e-13;39!CL:0000234;4.38e-13;39!CL:0000625;4.99e-12;11!CL:0000236;1.11e-09;13!CL:0000738;1.97e-09;136!CL:0000766;1.34e-08;69!CL:0000945;3.05e-08;24!CL:0000624;8.49e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.28e-47,115;CL:0000738,4.66e-45,136;CL:0002031,2.18e-38,120;CL:0000037,7.43e-36,168;CL:0000988,4.89e-35,177;CL:0002032,2.25e-32,161;CL:0000837,2.25e-32,161;CL:0000542,1.97e-28,53;CL:0000051,1.97e-28,53;CL:0000838,6.62e-28,52;CL:0000860,2.67e-21,42;CL:0002057,2.67e-21,42;CL:0000084,2.67e-19,25;CL:0000827,2.67e-19,25;CL:0000791,7.87e-19,18;CL:0000789,7.87e-19,18;CL:0002420,7.87e-19,18;CL:0002419,7.87e-19,18;CL:0000790,7.87e-19,18;CL:0000473,7.14e-18,48;CL:0000234,7.14e-18,48;CL:0000766,3.90e-17,72;CL:0002194,1.23e-16,59;CL:0000576,1.23e-16,59;CL:0000040,1.23e-16,59;CL:0000559,1.23e-16,59;CL:0002009,1.28e-15,61;CL:0000557,5.95e-14,67;CL:0000839,2.26e-13,66;CL:0000625,5.00e-12,11;CL:0000236,6.83e-10,14;CL:0000763,1.47e-09,108;CL:0000049,1.47e-09,108;CL:0000945,3.09e-08,24;CL:0000826,3.09e-08,24;CL:0000624,8.49e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;8.10e-19;18!CL:0000051;3.66e-17;53!CL:0002057;8.66e-16;42 | |ontology_enrichment_development_v019=CL:0000790;8.10e-19;18!CL:0000051;3.66e-17;53!CL:0002057;8.66e-16;42 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-33!115;UBERON:0002390!1.78e-21!102;UBERON:0003061!1.78e-21!102;UBERON:0002193!7.38e-19!112;UBERON:0001049!1.06e-16!57;UBERON:0005068!1.06e-16!57;UBERON:0006241!1.06e-16!57;UBERON:0007135!1.06e-16!57;UBERON:0003080!3.02e-14!42;UBERON:0002780!5.77e-14!41;UBERON:0001890!5.77e-14!41;UBERON:0006240!5.77e-14!41;UBERON:0002020!2.04e-13!34;UBERON:0003528!2.04e-13!34;UBERON:0001017!2.73e-13!82;UBERON:0001893!3.64e-13!34;UBERON:0002616!6.85e-13!59;UBERON:0001869!8.09e-13!32;UBERON:0005743!8.35e-13!86;UBERON:0002791!9.57e-13!33;UBERON:0000073!6.86e-12!94;UBERON:0001016!6.86e-12!94;UBERON:0000178!2.36e-11!15;UBERON:0000179!2.36e-11!15;UBERON:0000463!2.36e-11!15;UBERON:0002371!4.91e-11!80;UBERON:0002619!1.11e-10!22;UBERON:0000955!1.28e-10!69;UBERON:0006238!1.28e-10!69;UBERON:0000956!1.30e-10!25;UBERON:0000203!1.30e-10!25;UBERON:0001950!9.20e-10!20;UBERON:0003075!3.57e-09!86;UBERON:0007284!3.57e-09!86;UBERON:0001474!4.67e-09!86;UBERON:0002346!4.88e-08!90;UBERON:0003056!3.70e-07!61;UBERON:0002405!4.04e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.66e-33!115;UBERON:0002390!1.78e-21!102;UBERON:0003061!1.78e-21!102;UBERON:0002193!7.38e-19!112;UBERON:0001049!1.06e-16!57;UBERON:0005068!1.06e-16!57;UBERON:0006241!1.06e-16!57;UBERON:0007135!1.06e-16!57;UBERON:0003080!3.02e-14!42;UBERON:0002780!5.77e-14!41;UBERON:0001890!5.77e-14!41;UBERON:0006240!5.77e-14!41;UBERON:0002020!2.04e-13!34;UBERON:0003528!2.04e-13!34;UBERON:0001017!2.73e-13!82;UBERON:0001893!3.64e-13!34;UBERON:0002616!6.85e-13!59;UBERON:0001869!8.09e-13!32;UBERON:0005743!8.35e-13!86;UBERON:0002791!9.57e-13!33;UBERON:0000073!6.86e-12!94;UBERON:0001016!6.86e-12!94;UBERON:0000178!2.36e-11!15;UBERON:0000179!2.36e-11!15;UBERON:0000463!2.36e-11!15;UBERON:0002371!4.91e-11!80;UBERON:0002619!1.11e-10!22;UBERON:0000955!1.28e-10!69;UBERON:0006238!1.28e-10!69;UBERON:0000956!1.30e-10!25;UBERON:0000203!1.30e-10!25;UBERON:0001950!9.20e-10!20;UBERON:0003075!3.57e-09!86;UBERON:0007284!3.57e-09!86;UBERON:0001474!4.67e-09!86;UBERON:0002346!4.88e-08!90;UBERON:0003056!3.70e-07!61;UBERON:0002405!4.04e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-13;15!UBERON:0000179;1.75e-13;15!UBERON:0000463;1.75e-13;15!UBERON:0002619;7.98e-13;22!UBERON:0001950;9.90e-12;20!UBERON:0000956;1.62e-10;25!UBERON:0000203;1.62e-10;25!UBERON:0003528;2.14e-10;34!UBERON:0002020;2.14e-10;34!UBERON:0001893;2.15e-10;34!UBERON:0001869;2.63e-10;32!UBERON:0002791;3.96e-10;32!UBERON:0002780;1.38e-09;41!UBERON:0001890;1.38e-09;41!UBERON:0002390;2.28e-09;32!UBERON:0000073;3.14e-09;53!UBERON:0002616;3.14e-09;53!UBERON:0007023;8.58e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-13;15!UBERON:0000179;1.75e-13;15!UBERON:0000463;1.75e-13;15!UBERON:0002619;7.98e-13;22!UBERON:0001950;9.90e-12;20!UBERON:0000956;1.62e-10;25!UBERON:0000203;1.62e-10;25!UBERON:0003528;2.14e-10;34!UBERON:0002020;2.14e-10;34!UBERON:0001893;2.15e-10;34!UBERON:0001869;2.63e-10;32!UBERON:0002791;3.96e-10;32!UBERON:0002780;1.38e-09;41!UBERON:0001890;1.38e-09;41!UBERON:0002390;2.28e-09;32!UBERON:0000073;3.14e-09;53!UBERON:0002616;3.14e-09;53!UBERON:0007023;8.58e-07;114 | ||
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| ||
|short_description=p1@KCNA3 | |short_description=p1@KCNA3 | ||
}} | }} |
Revision as of 11:25, 21 November 2012
Short description: | p1@KCNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KCNA3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 78bp_to_ENST00000369769, NM_002232, uc001dzv.1_5end |
EntrezGene: | KCNA3 |
HGNC: | 6221 |
UniProt: | P22001Q6P2D3B2RA23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.25e-25 | 98 |
blood island | 6.25e-25 | 98 |
adult organism | 6.96e-25 | 114 |
hemolymphoid system | 1.52e-22 | 108 |
neural tube | 2.20e-15 | 56 |
neural rod | 2.20e-15 | 56 |
future spinal cord | 2.20e-15 | 56 |
neural keel | 2.20e-15 | 56 |
regional part of nervous system | 3.63e-14 | 53 |
regional part of brain | 3.63e-14 | 53 |
immune system | 1.47e-13 | 93 |
blood | 1.72e-13 | 15 |
haemolymphatic fluid | 1.72e-13 | 15 |
organism substance | 1.72e-13 | 15 |
regional part of cerebral cortex | 7.99e-13 | 22 |
regional part of forebrain | 1.22e-12 | 41 |
forebrain | 1.22e-12 | 41 |
anterior neural tube | 1.22e-12 | 41 |
future forebrain | 1.22e-12 | 41 |
brain grey matter | 2.49e-12 | 34 |
gray matter | 2.49e-12 | 34 |
bone marrow | 3.33e-12 | 76 |
central nervous system | 4.10e-12 | 81 |
telencephalon | 4.57e-12 | 34 |
neocortex | 1.05e-11 | 20 |
cerebral hemisphere | 1.32e-11 | 32 |
regional part of telencephalon | 2.46e-11 | 32 |
nervous system | 4.01e-11 | 89 |
cerebral cortex | 1.62e-10 | 25 |
pallium | 1.62e-10 | 25 |
brain | 2.46e-10 | 68 |
future brain | 2.46e-10 | 68 |
bone element | 2.69e-10 | 82 |
neural plate | 1.76e-08 | 82 |
presumptive neural plate | 1.76e-08 | 82 |
skeletal element | 3.17e-08 | 90 |
neurectoderm | 1.54e-07 | 86 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.