FFCP PHASE1:Hg19::chr4:37978974..37979050,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002194!1.97e-22!63;CL:0000576!1.97e-22!63;CL:0000040!1.97e-22!63;CL:0000559!1.97e-22!63;CL:0002009!3.99e-21!65;CL:0002057!1.02e-20!42;CL:0000557!8.66e-19!71;CL:0000766!5.01e-18!76;CL:0000839!1.05e-17!70;CL:0000860!3.41e-17!45;CL:0000763!2.16e-13!112;CL:0000049!2.16e-13!112;CL:0002087!1.15e-11!119;CL:0002371!3.33e-10!591;CL:0000738!3.48e-10!140;CL:0000037!3.18e-09!172;CL:0000566!3.18e-09!172;CL:0000144!4.54e-09!625;CL:0000048!1.37e-08!430;CL:0000034!1.58e-08!444;CL:0002031!1.72e-08!124;CL:0002032!3.14e-08!165;CL:0000837!3.14e-08!165;CL:0000723!3.14e-08!436;CL:0000988!1.11e-07!182 | |ontology_enrichment_celltype=CL:0002194!1.97e-22!63;CL:0000576!1.97e-22!63;CL:0000040!1.97e-22!63;CL:0000559!1.97e-22!63;CL:0002009!3.99e-21!65;CL:0002057!1.02e-20!42;CL:0000557!8.66e-19!71;CL:0000766!5.01e-18!76;CL:0000839!1.05e-17!70;CL:0000860!3.41e-17!45;CL:0000763!2.16e-13!112;CL:0000049!2.16e-13!112;CL:0002087!1.15e-11!119;CL:0002371!3.33e-10!591;CL:0000738!3.48e-10!140;CL:0000037!3.18e-09!172;CL:0000566!3.18e-09!172;CL:0000144!4.54e-09!625;CL:0000048!1.37e-08!430;CL:0000034!1.58e-08!444;CL:0002031!1.72e-08!124;CL:0002032!3.14e-08!165;CL:0000837!3.14e-08!165;CL:0000723!3.14e-08!436;CL:0000988!1.11e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-14;33!CL:0002057;1.06e-14;33!CL:0000473;1.48e-14;39!CL:0000234;1.48e-14;39!CL:0000576;1.66e-14;48!CL:0000766;8.41e-10;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.06e-14;33!CL:0002057;1.06e-14;33!CL:0000473;1.48e-14;39!CL:0000234;1.48e-14;39!CL:0000576;1.66e-14;48!CL:0000766;8.41e-10;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.72e-25,59;CL:0000576,2.72e-25,59;CL:0000040,2.72e-25,59;CL:0000559,2.72e-25,59;CL:0002009,8.68e-24,61;CL:0000473,2.80e-23,48;CL:0000234,2.80e-23,48;CL:0000557,4.62e-21,67;CL:0000860,1.02e-20,42;CL:0002057,1.02e-20,42;CL:0000766,3.82e-20,72;CL:0000839,6.68e-20,66;CL:0000763,1.07e-14,108;CL:0000049,1.07e-14,108;CL:0002087,7.68e-13,115;CL:0000738,3.65e-11,136;CL:0000037,4.84e-10,168;CL:0002031,2.09e-09,120;CL:0000048,3.42e-09,427;CL:0000034,3.99e-09,441;CL:0002032,5.26e-09,161;CL:0000837,5.26e-09,161;CL:0000723,8.13e-09,433;CL:0000988,3.60e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-15;42 | |ontology_enrichment_development_v019=CL:0002057;2.72e-15;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.52e-18!216;UBERON:0002371!2.53e-17!80;UBERON:0002405!1.86e-15!115;UBERON:0002204!6.35e-15!167;UBERON:0001474!9.07e-15!86;UBERON:0004765!1.29e-14!101;UBERON:0001434!1.29e-14!101;UBERON:0002193!3.54e-12!112;UBERON:0002390!1.67e-11!102;UBERON:0003061!1.67e-11!102;UBERON:0000926!9.72e-09!448;UBERON:0004120!9.72e-09!448;UBERON:0006603!9.72e-09!448 | |ontology_enrichment_uberon=UBERON:0003081!2.52e-18!216;UBERON:0002371!2.53e-17!80;UBERON:0002405!1.86e-15!115;UBERON:0002204!6.35e-15!167;UBERON:0001474!9.07e-15!86;UBERON:0004765!1.29e-14!101;UBERON:0001434!1.29e-14!101;UBERON:0002193!3.54e-12!112;UBERON:0002390!1.67e-11!102;UBERON:0003061!1.67e-11!102;UBERON:0000926!9.72e-09!448;UBERON:0004120!9.72e-09!448;UBERON:0006603!9.72e-09!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.77e-19,93;UBERON:0002371,2.81e-19,76;UBERON:0003081,1.37e-16,203;UBERON:0001474,2.04e-16,82;UBERON:0002204,1.36e-15,167;UBERON:0004765,1.69e-15,90;UBERON:0001434,1.81e-15,100;UBERON:0000926,3.45e-14,315;UBERON:0004120,3.45e-14,315;UBERON:0006603,3.45e-14,315;UBERON:0002193,2.30e-13,108;UBERON:0002390,1.02e-12,98;UBERON:0003061,1.02e-12,98 | |||
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| ||
|short_description=p1@TBC1D1 | |short_description=p1@TBC1D1 | ||
}} | }} |
Revision as of 10:13, 21 November 2012
Short description: | p1@TBC1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TBC1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011byf.1_5end |
EntrezGene: | TBC1D1 |
HGNC: | 11578 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.72e-25 | 59 |
monocyte | 2.72e-25 | 59 |
monoblast | 2.72e-25 | 59 |
promonocyte | 2.72e-25 | 59 |
macrophage dendritic cell progenitor | 8.68e-24 | 61 |
defensive cell | 2.80e-23 | 48 |
phagocyte | 2.80e-23 | 48 |
granulocyte monocyte progenitor cell | 4.62e-21 | 67 |
classical monocyte | 1.02e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-20 | 42 |
myeloid leukocyte | 3.82e-20 | 72 |
myeloid lineage restricted progenitor cell | 6.68e-20 | 66 |
myeloid cell | 1.07e-14 | 108 |
common myeloid progenitor | 1.07e-14 | 108 |
nongranular leukocyte | 7.68e-13 | 115 |
leukocyte | 3.65e-11 | 136 |
hematopoietic stem cell | 4.84e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 2.09e-09 | 120 |
multi fate stem cell | 3.42e-09 | 427 |
stem cell | 3.99e-09 | 441 |
hematopoietic oligopotent progenitor cell | 5.26e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.26e-09 | 161 |
somatic stem cell | 8.13e-09 | 433 |
hematopoietic cell | 3.60e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.77e-19 | 93 |
bone marrow | 2.81e-19 | 76 |
lateral plate mesoderm | 1.37e-16 | 203 |
bone element | 2.04e-16 | 82 |
musculoskeletal system | 1.36e-15 | 167 |
skeletal element | 1.69e-15 | 90 |
skeletal system | 1.81e-15 | 100 |
mesoderm | 3.45e-14 | 315 |
mesoderm-derived structure | 3.45e-14 | 315 |
presumptive mesoderm | 3.45e-14 | 315 |
hemolymphoid system | 2.30e-13 | 108 |
hematopoietic system | 1.02e-12 | 98 |
blood island | 1.02e-12 | 98 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.