FFCP PHASE1:Hg19::chr11:118213360..118213405,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!3.20e-32!172;CL:0000566!3.20e-32!172;CL:0000738!5.24e-32!140;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000988!1.83e-28!182;CL:0002087!2.12e-26!119;CL:0002031!3.33e-23!124;CL:0000084!9.01e-22!25;CL:0000827!9.01e-22!25;CL:0000791!3.68e-18!18;CL:0000789!3.68e-18!18;CL:0002420!3.68e-18!18;CL:0002419!3.68e-18!18;CL:0000790!3.68e-18!18;CL:0000763!3.53e-15!112;CL:0000049!3.53e-15!112;CL:0000838!5.84e-15!52;CL:0000542!1.96e-14!53;CL:0000051!1.96e-14!53;CL:0000766!2.75e-13!76;CL:0000625!1.79e-12!11;CL:0002057!3.16e-11!42;CL:0002194!1.53e-10!63;CL:0000576!1.53e-10!63;CL:0000040!1.53e-10!63;CL:0000559!1.53e-10!63;CL:0002009!1.79e-10!65;CL:0000860!7.53e-10!45;CL:0000557!1.05e-09!71;CL:0000839!1.94e-09!70;CL:0000624!2.65e-07!6 | |ontology_enrichment_celltype=CL:0000037!3.20e-32!172;CL:0000566!3.20e-32!172;CL:0000738!5.24e-32!140;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000988!1.83e-28!182;CL:0002087!2.12e-26!119;CL:0002031!3.33e-23!124;CL:0000084!9.01e-22!25;CL:0000827!9.01e-22!25;CL:0000791!3.68e-18!18;CL:0000789!3.68e-18!18;CL:0002420!3.68e-18!18;CL:0002419!3.68e-18!18;CL:0000790!3.68e-18!18;CL:0000763!3.53e-15!112;CL:0000049!3.53e-15!112;CL:0000838!5.84e-15!52;CL:0000542!1.96e-14!53;CL:0000051!1.96e-14!53;CL:0000766!2.75e-13!76;CL:0000625!1.79e-12!11;CL:0002057!3.16e-11!42;CL:0002194!1.53e-10!63;CL:0000576!1.53e-10!63;CL:0000040!1.53e-10!63;CL:0000559!1.53e-10!63;CL:0002009!1.79e-10!65;CL:0000860!7.53e-10!45;CL:0000557!1.05e-09!71;CL:0000839!1.94e-09!70;CL:0000624!2.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.10e-29;25!CL:0000791;1.22e-25;18!CL:0000789;1.22e-25;18!CL:0002419;1.22e-25;18!CL:0000625;1.37e-18;11!CL:0000624;1.57e-10;6!CL:0000542;2.61e-10;53!CL:0000094;6.45e-08;8!CL:0002087;1.69e-07;104 | |ontology_enrichment_celltype_v019=CL:0000084;1.10e-29;25!CL:0000791;1.22e-25;18!CL:0000789;1.22e-25;18!CL:0002419;1.22e-25;18!CL:0000625;1.37e-18;11!CL:0000624;1.57e-10;6!CL:0000542;2.61e-10;53!CL:0000094;6.45e-08;8!CL:0002087;1.69e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.09e-29,25;CL:0000827,1.09e-29,25;CL:0000791,1.23e-25,18;CL:0000789,1.23e-25,18;CL:0002420,1.23e-25,18;CL:0002419,1.23e-25,18;CL:0000790,1.23e-25,18;CL:0000037,1.22e-23,168;CL:0000738,1.82e-22,136;CL:0000988,1.93e-21,177;CL:0002032,3.81e-21,161;CL:0000837,3.81e-21,161;CL:0000625,1.38e-18,11;CL:0002087,3.69e-18,115;CL:0000838,4.62e-18,52;CL:0000542,1.51e-17,53;CL:0000051,1.51e-17,53;CL:0002031,5.99e-14,120;CL:0000624,1.58e-10,6;CL:0000094,5.33e-08,8;CL:0000763,4.23e-07,108;CL:0000049,4.23e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-25;18!CL:0000051;2.61e-10;53 | |ontology_enrichment_development_v019=CL:0000790;1.22e-25;18!CL:0000051;2.61e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-19!115;UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!5.74e-14!112;UBERON:0000178!1.09e-08!15;UBERON:0000179!1.09e-08!15;UBERON:0000463!1.09e-08!15;UBERON:0002405!9.06e-08!115;UBERON:0002371!2.40e-07!80 | |ontology_enrichment_uberon=UBERON:0007023!4.16e-19!115;UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!5.74e-14!112;UBERON:0000178!1.09e-08!15;UBERON:0000179!1.09e-08!15;UBERON:0000463!1.09e-08!15;UBERON:0002405!9.06e-08!115;UBERON:0002371!2.40e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-13;15!UBERON:0000179;1.61e-13;15!UBERON:0000463;1.61e-13;15!UBERON:0002390;2.14e-08;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-13;15!UBERON:0000179;1.61e-13;15!UBERON:0000463;1.61e-13;15!UBERON:0002390;2.14e-08;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-13,15;UBERON:0000179,1.58e-13,15;UBERON:0000463,1.58e-13,15;UBERON:0002390,1.72e-08,98;UBERON:0003061,1.72e-08,98;UBERON:0002193,2.87e-08,108;UBERON:0007023,3.13e-07,114 | |||
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| ||
|short_description=p1@CD3D | |short_description=p1@CD3D | ||
}} | }} |
Revision as of 08:20, 21 November 2012
Short description: | p1@CD3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CD3D_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000529594_5end |
EntrezGene: | CD3D |
HGNC: | 1673 |
UniProt: | E9PMT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.09e-29 | 25 |
pro-T cell | 1.09e-29 | 25 |
mature alpha-beta T cell | 1.23e-25 | 18 |
alpha-beta T cell | 1.23e-25 | 18 |
immature T cell | 1.23e-25 | 18 |
mature T cell | 1.23e-25 | 18 |
immature alpha-beta T cell | 1.23e-25 | 18 |
hematopoietic stem cell | 1.22e-23 | 168 |
leukocyte | 1.82e-22 | 136 |
hematopoietic cell | 1.93e-21 | 177 |
hematopoietic oligopotent progenitor cell | 3.81e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.81e-21 | 161 |
CD8-positive, alpha-beta T cell | 1.38e-18 | 11 |
nongranular leukocyte | 3.69e-18 | 115 |
lymphoid lineage restricted progenitor cell | 4.62e-18 | 52 |
lymphocyte | 1.51e-17 | 53 |
common lymphoid progenitor | 1.51e-17 | 53 |
hematopoietic lineage restricted progenitor cell | 5.99e-14 | 120 |
CD4-positive, alpha-beta T cell | 1.58e-10 | 6 |
granulocyte | 5.33e-08 | 8 |
myeloid cell | 4.23e-07 | 108 |
common myeloid progenitor | 4.23e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-13 | 15 |
haemolymphatic fluid | 1.58e-13 | 15 |
organism substance | 1.58e-13 | 15 |
hematopoietic system | 1.72e-08 | 98 |
blood island | 1.72e-08 | 98 |
hemolymphoid system | 2.87e-08 | 108 |
adult organism | 3.13e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.