FFCP PHASE1:Hg19::chr2:55844776..55844787,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.40e-15!115;UBERON:0001049!2.81e-11!57;UBERON:0005068!2.81e-11!57;UBERON:0006241!2.81e-11!57;UBERON:0007135!2.81e-11!57;UBERON:0002780!1.40e-10!41;UBERON:0001890!1.40e-10!41;UBERON:0006240!1.40e-10!41;UBERON:0000955!6.52e-10!69;UBERON:0006238!6.52e-10!69;UBERON:0003080!8.29e-10!42;UBERON:0001017!2.43e-09!82;UBERON:0002020!2.52e-09!34;UBERON:0003528!2.52e-09!34;UBERON:0005743!2.80e-09!86;UBERON:0001893!5.13e-09!34;UBERON:0002346!1.02e-08!90;UBERON:0003075!1.04e-08!86;UBERON:0007284!1.04e-08!86;UBERON:0002616!1.05e-08!59;UBERON:0000073!1.08e-08!94;UBERON:0001016!1.08e-08!94;UBERON:0002791!1.67e-08!33;UBERON:0001869!2.08e-08!32;UBERON:0003056!7.18e-08!61;UBERON:0000153!1.32e-07!129;UBERON:0007811!1.32e-07!129;UBERON:0000033!2.54e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!8.40e-15!115;UBERON:0001049!2.81e-11!57;UBERON:0005068!2.81e-11!57;UBERON:0006241!2.81e-11!57;UBERON:0007135!2.81e-11!57;UBERON:0002780!1.40e-10!41;UBERON:0001890!1.40e-10!41;UBERON:0006240!1.40e-10!41;UBERON:0000955!6.52e-10!69;UBERON:0006238!6.52e-10!69;UBERON:0003080!8.29e-10!42;UBERON:0001017!2.43e-09!82;UBERON:0002020!2.52e-09!34;UBERON:0003528!2.52e-09!34;UBERON:0005743!2.80e-09!86;UBERON:0001893!5.13e-09!34;UBERON:0002346!1.02e-08!90;UBERON:0003075!1.04e-08!86;UBERON:0007284!1.04e-08!86;UBERON:0002616!1.05e-08!59;UBERON:0000073!1.08e-08!94;UBERON:0001016!1.08e-08!94;UBERON:0002791!1.67e-08!33;UBERON:0001869!2.08e-08!32;UBERON:0003056!7.18e-08!61;UBERON:0000153!1.32e-07!129;UBERON:0007811!1.32e-07!129;UBERON:0000033!2.54e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.74e-11;34!UBERON:0002020;5.74e-11;34!UBERON:0001893;1.07e-10;34!UBERON:0001950;1.12e-10;20!UBERON:0000073;1.32e-10;53!UBERON:0002616;1.32e-10;53!UBERON:0001869;1.77e-10;32!UBERON:0002791;2.84e-10;32!UBERON:0002780;7.01e-10;41!UBERON:0001890;7.01e-10;41!UBERON:0002619;2.46e-09;22!UBERON:0000956;9.87e-08;25!UBERON:0000203;9.87e-08;25!UBERON:0001017;1.34e-07;75!UBERON:0000125;2.09e-07;9!UBERON:0002308;2.09e-07;9!UBERON:0000955;2.69e-07;68!UBERON:0000200;4.05e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0003528;5.74e-11;34!UBERON:0002020;5.74e-11;34!UBERON:0001893;1.07e-10;34!UBERON:0001950;1.12e-10;20!UBERON:0000073;1.32e-10;53!UBERON:0002616;1.32e-10;53!UBERON:0001869;1.77e-10;32!UBERON:0002791;2.84e-10;32!UBERON:0002780;7.01e-10;41!UBERON:0001890;7.01e-10;41!UBERON:0002619;2.46e-09;22!UBERON:0000956;9.87e-08;25!UBERON:0000203;9.87e-08;25!UBERON:0001017;1.34e-07;75!UBERON:0000125;2.09e-07;9!UBERON:0002308;2.09e-07;9!UBERON:0000955;2.69e-07;68!UBERON:0000200;4.05e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.48e-19,53;UBERON:0002616,4.48e-19,53;UBERON:0001049,6.34e-19,56;UBERON:0005068,6.34e-19,56;UBERON:0006241,6.34e-19,56;UBERON:0007135,6.34e-19,56;UBERON:0002780,1.33e-15,41;UBERON:0001890,1.33e-15,41;UBERON:0003080,1.33e-15,41;UBERON:0006240,1.33e-15,41;UBERON:0007023,1.66e-15,114;UBERON:0000955,2.19e-15,68;UBERON:0006238,2.19e-15,68;UBERON:0001016,3.50e-15,89;UBERON:0001017,8.03e-15,81;UBERON:0003528,5.09e-14,34;UBERON:0002020,5.09e-14,34;UBERON:0001893,1.62e-12,34;UBERON:0001869,2.30e-12,32;UBERON:0003075,2.65e-12,82;UBERON:0007284,2.65e-12,82;UBERON:0002791,3.48e-12,32;UBERON:0010371,4.60e-12,104;UBERON:0002346,3.50e-11,86;UBERON:0001950,7.18e-11,20;UBERON:0003056,7.78e-11,61;UBERON:0004121,2.97e-10,171;UBERON:0000924,2.97e-10,171;UBERON:0006601,2.97e-10,171;UBERON:0002619,1.65e-09,22;UBERON:0000125,1.16e-08,9;UBERON:0002308,1.16e-08,9;UBERON:0000956,6.99e-08,25;UBERON:0000203,6.99e-08,25 | |||
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| ||
|short_description=p6@SMEK2 | |short_description=p6@SMEK2 | ||
}} | }} |
Revision as of 01:31, 21 November 2012
Short description: | p6@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SMEK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NM_001122964, NM_020463_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | Q5MIZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.48e-19 | 53 |
regional part of brain | 4.48e-19 | 53 |
neural tube | 6.34e-19 | 56 |
neural rod | 6.34e-19 | 56 |
future spinal cord | 6.34e-19 | 56 |
neural keel | 6.34e-19 | 56 |
regional part of forebrain | 1.33e-15 | 41 |
forebrain | 1.33e-15 | 41 |
anterior neural tube | 1.33e-15 | 41 |
future forebrain | 1.33e-15 | 41 |
adult organism | 1.66e-15 | 114 |
brain | 2.19e-15 | 68 |
future brain | 2.19e-15 | 68 |
nervous system | 3.50e-15 | 89 |
central nervous system | 8.03e-15 | 81 |
brain grey matter | 5.09e-14 | 34 |
gray matter | 5.09e-14 | 34 |
telencephalon | 1.62e-12 | 34 |
cerebral hemisphere | 2.30e-12 | 32 |
neural plate | 2.65e-12 | 82 |
presumptive neural plate | 2.65e-12 | 82 |
regional part of telencephalon | 3.48e-12 | 32 |
ecto-epithelium | 4.60e-12 | 104 |
neurectoderm | 3.50e-11 | 86 |
neocortex | 7.18e-11 | 20 |
pre-chordal neural plate | 7.78e-11 | 61 |
ectoderm-derived structure | 2.97e-10 | 171 |
ectoderm | 2.97e-10 | 171 |
presumptive ectoderm | 2.97e-10 | 171 |
regional part of cerebral cortex | 1.65e-09 | 22 |
neural nucleus | 1.16e-08 | 9 |
nucleus of brain | 1.16e-08 | 9 |
cerebral cortex | 6.99e-08 | 25 |
pallium | 6.99e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.