FFCP PHASE1:Hg19::chr19:55574538..55574549,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.67e-10!254 | |ontology_enrichment_celltype=CL:0000066!1.67e-10!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-12;3 | |ontology_enrichment_development_v019=UBERON:0006215;3.48e-12;3 | ||
|ontology_enrichment_disease=DOID:305!5.61e-08!106 | |ontology_enrichment_disease=DOID:305!5.61e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.73e-09!347;UBERON:0000064!2.19e-08!219;UBERON:0000475!2.64e-08!365;UBERON:0002113!4.11e-07!27;UBERON:0003918!4.11e-07!27;UBERON:0005095!4.11e-07!27;UBERON:0007687!4.11e-07!27;UBERON:0000477!4.72e-07!286 | |ontology_enrichment_uberon=UBERON:0000481!2.73e-09!347;UBERON:0000064!2.19e-08!219;UBERON:0000475!2.64e-08!365;UBERON:0002113!4.11e-07!27;UBERON:0003918!4.11e-07!27;UBERON:0005095!4.11e-07!27;UBERON:0007687!4.11e-07!27;UBERON:0000477!4.72e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.78e-10;6!UBERON:0004732;3.51e-07;13!UBERON:0002680;5.39e-07;9!UBERON:0001895;5.39e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.78e-10;6!UBERON:0004732;3.51e-07;13!UBERON:0002680;5.39e-07;9!UBERON:0001895;5.39e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.69e-11,6;UBERON:0006215,5.69e-11,6;UBERON:0001781,5.91e-10,4;UBERON:0004732,1.65e-07,13;UBERON:0002680,2.58e-07,9;UBERON:0001895,2.58e-07,9;UBERON:0010092,2.58e-07,9;UBERON:0000966,9.39e-07,6;UBERON:0005388,9.39e-07,6;UBERON:0001802,9.39e-07,6 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0.697801167972428,0.655324116390517,1.05506791291381,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,0.738726348460727,1.42800483870977,0.313454721478088,0.286235987131057,0,0.376627918784408,0.61130724598361,0.903106483949403,1.10195093839151,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0.205601498999509,0.501559486172034,0.651844533267181,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.552700035571697,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.589405839739707,0.364295288292542,1.11235332835329,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.735326160691737,0,0.17859945656816,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,1.1409436430889,0.149448680551801,0,0.485618833104395,0.98315564691574,0,0.245668634623536,0.309977343527296,1.18800285728205,0.247266929278557,1.82032272387605,0,0.505008341862199,0.250237039743928,0,0.877955241761676,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0.412210116953756,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0,0.161646056818812,0,0.10075209822764,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0.731842236777572,0.265059536642971,0.69716365721711,0.621966330092223,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0.721879481669586,0.236613600079688,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,0.949082476444386,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.548751427043128,0,0.703702806881416,0.185176890317059,0,0,0,0.463721619900307,0.117408694235822,0.288732895522148,0,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.0895585227028483,1.45316969256981,0.383382679165211,0,0.176096868026452,0.414656231081544,0.288239906833923,0.25248486685276,0.190493682876507,0.763976851116555,0,1.71072446022705,0.411309970813294,0,0.285826432630578,0.224262168690721,0,0.1466765716419,0,0,0,0,0,1.02882949704857,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0.358121926479791,0.112085143993527,0,0.215627574859517,0,0,0,0,0.502548796003046,0,0,0,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0.587403472388222,0,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.483437798366489,0.40101294060657,0.184161977871793,0.459257792658427,0,0.393373244878272,0.451199612907412,0.462092022626489,0.784349769176855,1.46139224653261,0.633309773357254,1.13733384070897,0.340187410553031,0.863663664408557,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,2.3080511260475,1.64007322849853,0.976135183992909,0.618246069886334,0,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.614014698904518,0.551346289938122,0.322260734604821,0.145016693914229,0.511359764496605,0.178064071293475,0.165284915360978,0.192190067365106,1.14851441245126,0.10115778085555,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0,0.55597265731176,0.286249773483982,0.372158369359667,0.316379424718726,0,0.767693373934002,0.855877976067841,0.636406495851874,0.78494864019923,0.359744915166629,0,0,0,0,0,0.975267478179181,0.487426979262569,0,0.545999645631943,0,1.13008116620243,0,0,1.31535265576129,0,0,0,0,0.845086807596724,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,0,0.75894634753143,0,0.384888450902048,0.670302275535787,1.08890984861323,0.282431402330337,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0.735120647943095,0.185803175125719,0.28853842595289,0.0711418433484141,0.318852545457645,0.399158742865633,0.19150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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0.697801167972428,0.655324116390517,1.05506791291381,0.247532705920093,0,0.672325146451775,0,0,0.487932798790507,0.738726348460727,1.42800483870977,0.313454721478088,0.286235987131057,0,0.376627918784408,0.61130724598361,0.903106483949403,1.10195093839151,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0.570025487482497,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0,0,0,0.205601498999509,0.501559486172034,0.651844533267181,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.552700035571697,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.589405839739707,0.364295288292542,1.11235332835329,0,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.735326160691737,0,0.17859945656816,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.573673241497627,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,1.1409436430889,0.149448680551801,0,0.485618833104395,0.98315564691574,0,0.245668634623536,0.309977343527296,1.18800285728205,0.247266929278557,1.82032272387605,0,0.505008341862199,0.250237039743928,0,0.877955241761676,0.30648779579902,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0.412210116953756,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0,0.161646056818812,0,0.10075209822764,0.339121184620975,0.386521706326594,0.272746120590835,0.286804595389004,0.731842236777572,0.265059536642971,0.69716365721711,0.621966330092223,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0.721879481669586,0.236613600079688,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,0.949082476444386,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0.548751427043128,0,0.703702806881416,0.185176890317059,0,0,0,0.463721619900307,0.117408694235822,0.288732895522148,0,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.0895585227028483,1.45316969256981,0.383382679165211,0,0.176096868026452,0.414656231081544,0.288239906833923,0.25248486685276,0.190493682876507,0.763976851116555,0,1.71072446022705,0.411309970813294,0,0.285826432630578,0.224262168690721,0,0.1466765716419,0,0,0,0,0,1.02882949704857,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0.358121926479791,0.112085143993527,0,0.215627574859517,0,0,0,0,0.502548796003046,0,0,0,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0.587403472388222,0,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.483437798366489,0.40101294060657,0.184161977871793,0.459257792658427,0,0.393373244878272,0.451199612907412,0.462092022626489,0.784349769176855,1.46139224653261,0.633309773357254,1.13733384070897,0.340187410553031,0.863663664408557,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,2.3080511260475,1.64007322849853,0.976135183992909,0.618246069886334,0,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.614014698904518,0.551346289938122,0.322260734604821,0.145016693914229,0.511359764496605,0.178064071293475,0.165284915360978,0.192190067365106,1.14851441245126,0.10115778085555,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0,0.55597265731176,0.286249773483982,0.372158369359667,0.316379424718726,0,0.767693373934002,0.855877976067841,0.636406495851874,0.78494864019923,0.359744915166629,0,0,0,0,0,0.975267478179181,0.487426979262569,0,0.545999645631943,0,1.13008116620243,0,0,1.31535265576129,0,0,0,0,0.845086807596724,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,0,0.75894634753143,0,0.384888450902048,0.670302275535787,1.08890984861323,0.282431402330337,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,0.735120647943095,0.185803175125719,0.28853842595289,0.0711418433484141,0.318852545457645,0.399158742865633,0.19150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| ||
|short_description=p3@RDH13 | |short_description=p3@RDH13 | ||
}} | }} |
Revision as of 00:30, 21 November 2012
Short description: | p3@RDH13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RDH13_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000415061, NM_001145971, NR_027381, NR_027382, uc002qio.3, uc010yfq.1_5end |
EntrezGene: | RDH13 |
HGNC: | 19978 |
UniProt: | Q8NBN7B3KVA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.69e-11 | 6 |
rhombic lip | 5.69e-11 | 6 |
layer of retina | 5.91e-10 | 4 |
segmental subdivision of nervous system | 1.65e-07 | 13 |
regional part of metencephalon | 2.58e-07 | 9 |
metencephalon | 2.58e-07 | 9 |
future metencephalon | 2.58e-07 | 9 |
retina | 9.39e-07 | 6 |
photoreceptor array | 9.39e-07 | 6 |
posterior segment of eyeball | 9.39e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.