FFCP PHASE1:Hg19::chr19:17186577..17186637,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!6.60e-35!76;CL:0000557!2.15e-28!71;CL:0002194!2.66e-27!63;CL:0000576!2.66e-27!63;CL:0000040!2.66e-27!63;CL:0000559!2.66e-27!63;CL:0000839!2.68e-27!70;CL:0000738!3.19e-27!140;CL:0002057!2.24e-26!42;CL:0002009!2.28e-25!65;CL:0000763!2.05e-24!112;CL:0000049!2.05e-24!112;CL:0000860!1.63e-23!45;CL:0000988!9.70e-23!182;CL:0000037!5.06e-22!172;CL:0000566!5.06e-22!172;CL:0002087!1.09e-20!119;CL:0002032!1.26e-20!165;CL:0000837!1.26e-20!165;CL:0002031!1.37e-19!124;CL:0000048!2.70e-18!430;CL:0000134!7.56e-17!358;CL:0000723!1.50e-16!436;CL:0000219!1.58e-16!390;CL:0000034!1.55e-15!444;CL:0002320!2.01e-15!365;CL:0002371!6.38e-09!591 | |ontology_enrichment_celltype=CL:0000766!6.60e-35!76;CL:0000557!2.15e-28!71;CL:0002194!2.66e-27!63;CL:0000576!2.66e-27!63;CL:0000040!2.66e-27!63;CL:0000559!2.66e-27!63;CL:0000839!2.68e-27!70;CL:0000738!3.19e-27!140;CL:0002057!2.24e-26!42;CL:0002009!2.28e-25!65;CL:0000763!2.05e-24!112;CL:0000049!2.05e-24!112;CL:0000860!1.63e-23!45;CL:0000988!9.70e-23!182;CL:0000037!5.06e-22!172;CL:0000566!5.06e-22!172;CL:0002087!1.09e-20!119;CL:0002032!1.26e-20!165;CL:0000837!1.26e-20!165;CL:0002031!1.37e-19!124;CL:0000048!2.70e-18!430;CL:0000134!7.56e-17!358;CL:0000723!1.50e-16!436;CL:0000219!1.58e-16!390;CL:0000034!1.55e-15!444;CL:0002320!2.01e-15!365;CL:0002371!6.38e-09!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.29e-20;33!CL:0002057;5.29e-20;33!CL:0000473;1.37e-19;39!CL:0000234;1.37e-19;39!CL:0000576;3.95e-16;48!CL:0000766;8.10e-16;69!CL:0000763;2.49e-08;100!CL:0002087;5.26e-07;104!CL:0000738;6.14e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;5.29e-20;33!CL:0002057;5.29e-20;33!CL:0000473;1.37e-19;39!CL:0000234;1.37e-19;39!CL:0000576;3.95e-16;48!CL:0000766;8.10e-16;69!CL:0000763;2.49e-08;100!CL:0002087;5.26e-07;104!CL:0000738;6.14e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.02e-37,72;CL:0000557,3.97e-30,67;CL:0000473,9.86e-30,48;CL:0000234,9.86e-30,48;CL:0002194,3.44e-29,59;CL:0000576,3.44e-29,59;CL:0000040,3.44e-29,59;CL:0000559,3.44e-29,59;CL:0000839,5.41e-29,66;CL:0000738,4.79e-28,136;CL:0002009,4.51e-27,61;CL:0000860,2.24e-26,42;CL:0002057,2.24e-26,42;CL:0000763,2.36e-25,108;CL:0000049,2.36e-25,108;CL:0000988,4.42e-23,177;CL:0000037,1.44e-22,168;CL:0002087,1.91e-21,115;CL:0002032,3.67e-21,161;CL:0000837,3.67e-21,161;CL:0002031,2.80e-20,120;CL:0000048,1.48e-18,427;CL:0000134,3.37e-17,354;CL:0000219,7.52e-17,386;CL:0000723,8.55e-17,433;CL:0000034,9.09e-16,441;CL:0002320,9.48e-16,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-19;42!CL:0000049;5.29e-08;108 | |ontology_enrichment_development_v019=CL:0002057;3.37e-19;42!CL:0000049;5.29e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.36e-38!216;UBERON:0002193!6.53e-33!112;UBERON:0002390!1.33e-32!102;UBERON:0003061!1.33e-32!102;UBERON:0002371!1.44e-25!80;UBERON:0001474!2.06e-24!86;UBERON:0002405!1.49e-19!115;UBERON:0004765!2.02e-18!101;UBERON:0001434!2.02e-18!101;UBERON:0002204!4.12e-16!167;UBERON:0002384!1.09e-15!375;UBERON:0004535!8.48e-13!110;UBERON:0001009!7.32e-12!113;UBERON:0000055!5.51e-10!69;UBERON:0001981!7.40e-10!60;UBERON:0007500!7.40e-10!60;UBERON:0004537!7.40e-10!60;UBERON:0006965!7.40e-10!60;UBERON:0004872!2.11e-09!84;UBERON:0002049!4.31e-09!79;UBERON:0007798!4.31e-09!79;UBERON:0001637!6.04e-08!42;UBERON:0003509!6.04e-08!42;UBERON:0004572!6.04e-08!42;UBERON:0000178!3.70e-07!15;UBERON:0000179!3.70e-07!15;UBERON:0000463!3.70e-07!15 | |ontology_enrichment_uberon=UBERON:0003081!6.36e-38!216;UBERON:0002193!6.53e-33!112;UBERON:0002390!1.33e-32!102;UBERON:0003061!1.33e-32!102;UBERON:0002371!1.44e-25!80;UBERON:0001474!2.06e-24!86;UBERON:0002405!1.49e-19!115;UBERON:0004765!2.02e-18!101;UBERON:0001434!2.02e-18!101;UBERON:0002204!4.12e-16!167;UBERON:0002384!1.09e-15!375;UBERON:0004535!8.48e-13!110;UBERON:0001009!7.32e-12!113;UBERON:0000055!5.51e-10!69;UBERON:0001981!7.40e-10!60;UBERON:0007500!7.40e-10!60;UBERON:0004537!7.40e-10!60;UBERON:0006965!7.40e-10!60;UBERON:0004872!2.11e-09!84;UBERON:0002049!4.31e-09!79;UBERON:0007798!4.31e-09!79;UBERON:0001637!6.04e-08!42;UBERON:0003509!6.04e-08!42;UBERON:0004572!6.04e-08!42;UBERON:0000178!3.70e-07!15;UBERON:0000179!3.70e-07!15;UBERON:0000463!3.70e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.73e-07;15!UBERON:0000179;3.73e-07;15!UBERON:0000463;3.73e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.73e-07;15!UBERON:0000179;3.73e-07;15!UBERON:0000463;3.73e-07;15 | ||
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| ||
|short_description=p1@MYO9B | |short_description=p1@MYO9B | ||
}} | }} |
Revision as of 16:27, 20 November 2012
Short description: | p1@MYO9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYO9B_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_NM_001130065, NM_004145, uc002nfi.2, uc010eak.2_5end |
EntrezGene: | MYO9B |
HGNC: | 7609 |
UniProt: | Q4LE74Q8WVD2B0I1T6Q13459 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.02e-37 | 72 |
granulocyte monocyte progenitor cell | 3.97e-30 | 67 |
defensive cell | 9.86e-30 | 48 |
phagocyte | 9.86e-30 | 48 |
monopoietic cell | 3.44e-29 | 59 |
monocyte | 3.44e-29 | 59 |
monoblast | 3.44e-29 | 59 |
promonocyte | 3.44e-29 | 59 |
myeloid lineage restricted progenitor cell | 5.41e-29 | 66 |
leukocyte | 4.79e-28 | 136 |
macrophage dendritic cell progenitor | 4.51e-27 | 61 |
classical monocyte | 2.24e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.24e-26 | 42 |
myeloid cell | 2.36e-25 | 108 |
common myeloid progenitor | 2.36e-25 | 108 |
hematopoietic cell | 4.42e-23 | 177 |
hematopoietic stem cell | 1.44e-22 | 168 |
nongranular leukocyte | 1.91e-21 | 115 |
hematopoietic oligopotent progenitor cell | 3.67e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 2.80e-20 | 120 |
multi fate stem cell | 1.48e-18 | 427 |
mesenchymal cell | 3.37e-17 | 354 |
motile cell | 7.52e-17 | 386 |
somatic stem cell | 8.55e-17 | 433 |
stem cell | 9.09e-16 | 441 |
connective tissue cell | 9.48e-16 | 361 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.07e-39 | 203 |
hemolymphoid system | 3.72e-34 | 108 |
hematopoietic system | 5.80e-34 | 98 |
blood island | 5.80e-34 | 98 |
immune system | 8.64e-28 | 93 |
bone marrow | 5.92e-27 | 76 |
bone element | 1.21e-25 | 82 |
mesoderm | 2.47e-19 | 315 |
mesoderm-derived structure | 2.47e-19 | 315 |
presumptive mesoderm | 2.47e-19 | 315 |
skeletal element | 2.66e-19 | 90 |
skeletal system | 1.97e-17 | 100 |
connective tissue | 5.20e-16 | 371 |
musculoskeletal system | 3.33e-15 | 167 |
cardiovascular system | 1.99e-12 | 109 |
circulatory system | 1.66e-11 | 112 |
vessel | 1.31e-09 | 68 |
epithelial tube open at both ends | 1.81e-09 | 59 |
blood vessel | 1.81e-09 | 59 |
blood vasculature | 1.81e-09 | 59 |
vascular cord | 1.81e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 4.70e-09 | 83 |
vasculature | 9.61e-09 | 78 |
vascular system | 9.61e-09 | 78 |
artery | 6.04e-08 | 42 |
arterial blood vessel | 6.04e-08 | 42 |
arterial system | 6.04e-08 | 42 |
blood | 3.70e-07 | 15 |
haemolymphatic fluid | 3.70e-07 | 15 |
organism substance | 3.70e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.