FFCP PHASE1:Hg19::chr3:49726965..49727014,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-23!115;UBERON:0001049!1.26e-14!57;UBERON:0005068!1.26e-14!57;UBERON:0006241!1.26e-14!57;UBERON:0007135!1.26e-14!57;UBERON:0002616!1.44e-14!59;UBERON:0002780!3.45e-12!41;UBERON:0001890!3.45e-12!41;UBERON:0006240!3.45e-12!41;UBERON:0003080!8.66e-12!42;UBERON:0003075!5.74e-11!86;UBERON:0007284!5.74e-11!86;UBERON:0000955!8.10e-11!69;UBERON:0006238!8.10e-11!69;UBERON:0001893!1.02e-10!34;UBERON:0002020!1.50e-10!34;UBERON:0003528!1.50e-10!34;UBERON:0001869!2.18e-10!32;UBERON:0002791!3.42e-10!33;UBERON:0002346!4.92e-10!90;UBERON:0003056!2.95e-09!61;UBERON:0002619!9.93e-09!22;UBERON:0001017!1.46e-08!82;UBERON:0005743!1.88e-08!86;UBERON:0000025!2.28e-08!194;UBERON:0001950!6.57e-08!20;UBERON:0000956!1.31e-07!25;UBERON:0000203!1.31e-07!25;UBERON:0000153!2.58e-07!129;UBERON:0007811!2.58e-07!129;UBERON:0000033!7.54e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.52e-23!115;UBERON:0001049!1.26e-14!57;UBERON:0005068!1.26e-14!57;UBERON:0006241!1.26e-14!57;UBERON:0007135!1.26e-14!57;UBERON:0002616!1.44e-14!59;UBERON:0002780!3.45e-12!41;UBERON:0001890!3.45e-12!41;UBERON:0006240!3.45e-12!41;UBERON:0003080!8.66e-12!42;UBERON:0003075!5.74e-11!86;UBERON:0007284!5.74e-11!86;UBERON:0000955!8.10e-11!69;UBERON:0006238!8.10e-11!69;UBERON:0001893!1.02e-10!34;UBERON:0002020!1.50e-10!34;UBERON:0003528!1.50e-10!34;UBERON:0001869!2.18e-10!32;UBERON:0002791!3.42e-10!33;UBERON:0002346!4.92e-10!90;UBERON:0003056!2.95e-09!61;UBERON:0002619!9.93e-09!22;UBERON:0001017!1.46e-08!82;UBERON:0005743!1.88e-08!86;UBERON:0000025!2.28e-08!194;UBERON:0001950!6.57e-08!20;UBERON:0000956!1.31e-07!25;UBERON:0000203!1.31e-07!25;UBERON:0000153!2.58e-07!129;UBERON:0007811!2.58e-07!129;UBERON:0000033!7.54e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.53e-09;32!UBERON:0001893;5.23e-09;34!UBERON:0002791;6.42e-09;32!UBERON:0003528;9.76e-09;34!UBERON:0002020;9.76e-09;34!UBERON:0002619;1.17e-08;22!UBERON:0002780;1.21e-08;41!UBERON:0001890;1.21e-08;41!UBERON:0000073;1.27e-08;53!UBERON:0002616;1.27e-08;53!UBERON:0001950;7.56e-08;20!UBERON:0000956;1.91e-07;25!UBERON:0000203;1.91e-07;25!UBERON:0007023;4.45e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0001869;4.53e-09;32!UBERON:0001893;5.23e-09;34!UBERON:0002791;6.42e-09;32!UBERON:0003528;9.76e-09;34!UBERON:0002020;9.76e-09;34!UBERON:0002619;1.17e-08;22!UBERON:0002780;1.21e-08;41!UBERON:0001890;1.21e-08;41!UBERON:0000073;1.27e-08;53!UBERON:0002616;1.27e-08;53!UBERON:0001950;7.56e-08;20!UBERON:0000956;1.91e-07;25!UBERON:0000203;1.91e-07;25!UBERON:0007023;4.45e-07;114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.83e-23,114;UBERON:0000073,2.36e-15,53;UBERON:0002616,2.36e-15,53;UBERON:0001049,5.28e-15,56;UBERON:0005068,5.28e-15,56;UBERON:0006241,5.28e-15,56;UBERON:0007135,5.28e-15,56;UBERON:0003075,7.44e-13,82;UBERON:0007284,7.44e-13,82;UBERON:0010371,1.29e-12,104;UBERON:0002780,3.45e-12,41;UBERON:0001890,3.45e-12,41;UBERON:0003080,3.45e-12,41;UBERON:0006240,3.45e-12,41;UBERON:0002346,9.24e-12,86;UBERON:0000955,4.58e-11,68;UBERON:0006238,4.58e-11,68;UBERON:0001893,1.02e-10,34;UBERON:0003528,1.50e-10,34;UBERON:0002020,1.50e-10,34;UBERON:0001869,2.18e-10,32;UBERON:0002791,3.46e-10,32;UBERON:0003056,2.16e-09,61;UBERON:0001017,9.64e-09,81;UBERON:0002619,9.93e-09,22;UBERON:0010314,1.07e-08,132;UBERON:0000025,1.88e-08,192;UBERON:0001950,6.57e-08,20;UBERON:0000956,1.31e-07,25;UBERON:0000203,1.31e-07,25 | |||
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| ||
|short_description=p1@RNF123 | |short_description=p1@RNF123 | ||
}} | }} |
Revision as of 16:09, 20 November 2012
Short description: | p1@RNF123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNF123_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389066, ENST00000432042, ENST00000443204, ENST00000454491, ENST00000457726, ENST00000486102, ENST00000487805, NM_022064, uc003cxh.2_5end |
EntrezGene: | RNF123 |
HGNC: | 21148 |
UniProt: | C9J266F8WB91C9JN91C9JS59Q5XPI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.83e-23 | 114 |
regional part of nervous system | 2.36e-15 | 53 |
regional part of brain | 2.36e-15 | 53 |
neural tube | 5.28e-15 | 56 |
neural rod | 5.28e-15 | 56 |
future spinal cord | 5.28e-15 | 56 |
neural keel | 5.28e-15 | 56 |
neural plate | 7.44e-13 | 82 |
presumptive neural plate | 7.44e-13 | 82 |
ecto-epithelium | 1.29e-12 | 104 |
regional part of forebrain | 3.45e-12 | 41 |
forebrain | 3.45e-12 | 41 |
anterior neural tube | 3.45e-12 | 41 |
future forebrain | 3.45e-12 | 41 |
neurectoderm | 9.24e-12 | 86 |
brain | 4.58e-11 | 68 |
future brain | 4.58e-11 | 68 |
telencephalon | 1.02e-10 | 34 |
brain grey matter | 1.50e-10 | 34 |
gray matter | 1.50e-10 | 34 |
cerebral hemisphere | 2.18e-10 | 32 |
regional part of telencephalon | 3.46e-10 | 32 |
pre-chordal neural plate | 2.16e-09 | 61 |
central nervous system | 9.64e-09 | 81 |
regional part of cerebral cortex | 9.93e-09 | 22 |
structure with developmental contribution from neural crest | 1.07e-08 | 132 |
tube | 1.88e-08 | 192 |
neocortex | 6.57e-08 | 20 |
cerebral cortex | 1.31e-07 | 25 |
pallium | 1.31e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.