FFCP PHASE1:Hg19::chr2:238334021..238334052,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000192!1.68e-11!42;CL:0000514!1.68e-11!42;CL:0000187!2.40e-11!54;CL:0000055!9.28e-11!180;CL:0002494!1.30e-10!16;CL:0000680!1.84e-10!57;CL:0000056!1.84e-10!57;CL:0000355!1.84e-10!57;CL:0000183!6.37e-10!59;CL:0000393!1.14e-09!60;CL:0000211!1.14e-09!60;CL:0000222!1.02e-08!119;CL:0000569!8.81e-08!4;CL:0000011!8.81e-08!4;CL:0000057!1.82e-07!75;CL:0000359!6.69e-07!32 | |ontology_enrichment_celltype=CL:0000192!1.68e-11!42;CL:0000514!1.68e-11!42;CL:0000187!2.40e-11!54;CL:0000055!9.28e-11!180;CL:0002494!1.30e-10!16;CL:0000680!1.84e-10!57;CL:0000056!1.84e-10!57;CL:0000355!1.84e-10!57;CL:0000183!6.37e-10!59;CL:0000393!1.14e-09!60;CL:0000211!1.14e-09!60;CL:0000222!1.02e-08!119;CL:0000569!8.81e-08!4;CL:0000011!8.81e-08!4;CL:0000057!1.82e-07!75;CL:0000359!6.69e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002554;2.46e-14;2!CL:0002195;1.54e-13;2!CL:0002571;1.54e-13;2!CL:0000077;8.35e-12;19!CL:0002568;2.70e-08;1!CL:0002174;4.21e-08;1!CL:0000501;4.21e-08;1!CL:0002557;1.31e-07;1!CL:0002581;1.31e-07;1!CL:0002591;1.31e-07;1!CL:0002594;3.33e-07;4 | |ontology_enrichment_celltype_v019=CL:0002554;2.46e-14;2!CL:0002195;1.54e-13;2!CL:0002571;1.54e-13;2!CL:0000077;8.35e-12;19!CL:0002568;2.70e-08;1!CL:0002174;4.21e-08;1!CL:0000501;4.21e-08;1!CL:0002557;1.31e-07;1!CL:0002581;1.31e-07;1!CL:0002591;1.31e-07;1!CL:0002594;3.33e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002554,1.89e-14,2;CL:0002195,1.44e-13,2;CL:0002571,1.44e-13,2;CL:0000077,7.73e-12,19;CL:0002568,2.70e-08,1;CL:0002174,4.66e-08,1;CL:0000501,4.66e-08,1;CL:0000222,1.07e-07,121;CL:0002581,1.26e-07,1;CL:0002557,1.44e-07,1;CL:0002591,1.75e-07,1;CL:0002594,3.44e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!3.16e-20!14;DOID:193!7.55e-10!29;DOID:120!5.23e-09!27 | |ontology_enrichment_disease=DOID:2394!3.16e-20!14;DOID:193!7.55e-10!29;DOID:120!5.23e-09!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.92e-12;14!DOID:193;7.07e-08;29 | |ontology_enrichment_disease_v019=DOID:2394;5.92e-12;14!DOID:193;7.07e-08;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,6.13e-12,14;DOID:193,7.35e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0000948!2.20e-13!24;UBERON:0005498!2.20e-13!24;UBERON:0004140!2.20e-13!24;UBERON:0009881!2.20e-13!24;UBERON:0004141!2.20e-13!24;UBERON:0003084!2.20e-13!24;UBERON:0007005!2.20e-13!24;UBERON:0004139!2.20e-13!24;UBERON:0004291!2.20e-13!24;UBERON:0004872!1.37e-11!84;UBERON:0007100!1.67e-11!27;UBERON:0000992!2.33e-11!13;UBERON:0002118!3.69e-11!5;UBERON:0004532!3.69e-11!5;UBERON:0004535!8.41e-10!110;UBERON:0001134!2.02e-09!61;UBERON:0002036!2.02e-09!61;UBERON:0003082!2.02e-09!61;UBERON:0001009!2.47e-09!113;UBERON:0003914!2.99e-09!118;UBERON:0002385!5.90e-09!63;UBERON:0001015!5.90e-09!63;UBERON:0000383!5.90e-09!63;UBERON:0000991!1.04e-07!21;UBERON:0009196!1.04e-07!21;UBERON:0009117!1.04e-07!21;UBERON:0005564!1.04e-07!21;UBERON:0004290!1.51e-07!70;UBERON:0003134!1.83e-07!37;UBERON:0000474!1.83e-07!37;UBERON:0004176!2.89e-07!22;UBERON:0000490!7.40e-07!138 | |ontology_enrichment_uberon=UBERON:0000948!2.20e-13!24;UBERON:0005498!2.20e-13!24;UBERON:0004140!2.20e-13!24;UBERON:0009881!2.20e-13!24;UBERON:0004141!2.20e-13!24;UBERON:0003084!2.20e-13!24;UBERON:0007005!2.20e-13!24;UBERON:0004139!2.20e-13!24;UBERON:0004291!2.20e-13!24;UBERON:0004872!1.37e-11!84;UBERON:0007100!1.67e-11!27;UBERON:0000992!2.33e-11!13;UBERON:0002118!3.69e-11!5;UBERON:0004532!3.69e-11!5;UBERON:0004535!8.41e-10!110;UBERON:0001134!2.02e-09!61;UBERON:0002036!2.02e-09!61;UBERON:0003082!2.02e-09!61;UBERON:0001009!2.47e-09!113;UBERON:0003914!2.99e-09!118;UBERON:0002385!5.90e-09!63;UBERON:0001015!5.90e-09!63;UBERON:0000383!5.90e-09!63;UBERON:0000991!1.04e-07!21;UBERON:0009196!1.04e-07!21;UBERON:0009117!1.04e-07!21;UBERON:0005564!1.04e-07!21;UBERON:0004290!1.51e-07!70;UBERON:0003134!1.83e-07!37;UBERON:0000474!1.83e-07!37;UBERON:0004176!2.89e-07!22;UBERON:0000490!7.40e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.54e-13;2!UBERON:0002012;1.54e-13;2!UBERON:0008886;1.54e-13;2!UBERON:0001310;3.33e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000078;1.54e-13;2!UBERON:0002012;1.54e-13;2!UBERON:0008886;1.54e-13;2!UBERON:0001310;3.33e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.26e-13,2;UBERON:0007497,2.26e-13,2;UBERON:0003643,2.26e-13,2;UBERON:0003504,2.26e-13,2;UBERON:0003469,2.26e-13,2;UBERON:0003496,2.26e-13,2;UBERON:0002012,2.26e-13,2;UBERON:0008886,2.26e-13,2;UBERON:0007303,2.26e-13,2;UBERON:0002061,2.26e-13,2;UBERON:0005432,2.26e-13,2;UBERON:0004363,2.26e-13,2;UBERON:0004145,3.24e-09,3;UBERON:0001310,3.44e-07,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.286836620748814,0,0,0,0.74000264525148,0,1.21239604862719,0.490385709340376,2.11900398702904,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,3.64064544775211,2.87447256726495,0,0,0,0.438977620880838,0,0,1.24775401476023,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,2.057870056657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30756353456,0,0,0,0,0,0,0,1.14382394926518,0,1.64648067356154,0,1.77695974371273,0.791951872933429,2.1100756394171,1.74306691720059,4.59875759437462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0.160853921143607,1.48418066444991,0,0.887808626565635,0,0,0,0,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,2.83331112147576,0,0,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,1.27281299170375,0,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0.545999645631943,2.68670320712054,1.13008116620243,0,0,0,0,0,1.82619339266434,0,0.563391205064483,0.860468113224309,0.196498082026242,1.07001315444375,0.709522128141196,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,3.0083580899397,0,0.279282401272254,0,0,0,0,0,0.739018197353989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0.228840068396924,0.907385542579434,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,3.45594228925393,0.521745061811734,4.35747066091933,5.71207818253193,0.406870733204662,0.545545977607678,8.80766567748405,2.32016879939247,0.796191777397232,0,0,0,0,0.385239660814607,0,0,3.85400073370863,1.85217979459067,0,0.358177682162975,0,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0.606351566874658,0,0.342233301085281,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0.286836620748814,0,0,0,0.74000264525148,0,1.21239604862719,0.490385709340376,2.11900398702904,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0,0,0,3.64064544775211,2.87447256726495,0,0,0,0.438977620880838,0,0,1.24775401476023,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,2.057870056657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30756353456,0,0,0,0,0,0,0,1.14382394926518,0,1.64648067356154,0,1.77695974371273,0.791951872933429,2.1100756394171,1.74306691720059,4.59875759437462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0.160853921143607,1.48418066444991,0,0.887808626565635,0,0,0,0,0,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,2.83331112147576,0,0,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,1.27281299170375,0,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0.545999645631943,2.68670320712054,1.13008116620243,0,0,0,0,0,1.82619339266434,0,0.563391205064483,0.860468113224309,0.196498082026242,1.07001315444375,0.709522128141196,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0,0,0,3.0083580899397,0,0.279282401272254,0,0,0,0,0,0.739018197353989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0.228840068396924,0.907385542579434,0.15543720058278,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,3.45594228925393,0.521745061811734,4.35747066091933,5.71207818253193,0.406870733204662,0.545545977607678,8.80766567748405,2.32016879939247,0.796191777397232,0,0,0,0,0.385239660814607,0,0,3.85400073370863,1.85217979459067,0,0.358177682162975,0,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0.186224142887574,0,0,0.606351566874658,0,0.342233301085281,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p1@ENST00000409162 | |short_description=p1@ENST00000409162 | ||
}} | }} |
Revision as of 10:28, 20 November 2012
Short description: | p1@ENST00000409162 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000409162_5end |
Coexpression cluster: | NA |
Association with transcript: | -102bp_to_ENST00000409162_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 1.89e-14 | 2 |
hepatic stem cell | 1.44e-13 | 2 |
hepatic mesenchymal stem cell | 1.44e-13 | 2 |
mesothelial cell | 7.73e-12 | 19 |
mesenchymal stem cell of Wharton's jelly | 2.70e-08 | 1 |
follicular cell of ovary | 4.66e-08 | 1 |
granulosa cell | 4.66e-08 | 1 |
mesodermal cell | 1.07e-07 | 121 |
perirenal preadipocyte | 1.26e-07 | 1 |
fibroblast of pulmonary artery | 1.44e-07 | 1 |
smooth muscle cell of the pulmonary artery | 1.75e-07 | 1 |
smooth muscle cell of the umbilical artery | 3.44e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.26e-13 | 2 |
developing epithelial placode | 2.26e-13 | 2 |
respiratory system arterial blood vessel | 2.26e-13 | 2 |
respiratory system blood vessel | 2.26e-13 | 2 |
respiratory system artery | 2.26e-13 | 2 |
head blood vessel | 2.26e-13 | 2 |
pulmonary artery | 2.26e-13 | 2 |
pulmonary vascular system | 2.26e-13 | 2 |
pharyngeal vasculature | 2.26e-13 | 2 |
truncus arteriosus | 2.26e-13 | 2 |
aortic sac | 2.26e-13 | 2 |
pharyngeal arch artery | 2.26e-13 | 2 |
outflow tract | 3.24e-09 | 3 |
umbilical artery | 3.44e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.13e-12 | 14 |
reproductive organ cancer | 7.35e-08 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.