FFCP PHASE1:Hg19::chr13:93879196..93879223,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.40e-28!180;CL:0000057!1.37e-12!75;CL:0000393!2.02e-10!60;CL:0000211!2.02e-10!60;CL:0000680!1.48e-09!57;CL:0000056!1.48e-09!57;CL:0000355!1.48e-09!57;CL:0000187!4.28e-09!54;CL:0000183!6.68e-09!59;CL:0002494!1.83e-07!16;CL:0000327!6.30e-07!14 | |ontology_enrichment_celltype=CL:0000055!2.40e-28!180;CL:0000057!1.37e-12!75;CL:0000393!2.02e-10!60;CL:0000211!2.02e-10!60;CL:0000680!1.48e-09!57;CL:0000056!1.48e-09!57;CL:0000355!1.48e-09!57;CL:0000187!4.28e-09!54;CL:0000183!6.68e-09!59;CL:0002494!1.83e-07!16;CL:0000327!6.30e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002494;1.04e-07;16!CL:0000499;1.23e-07;28!CL:0000327;2.01e-07;15!CL:0000153;2.57e-07;9!CL:0000447;2.57e-07;9!CL:0000188;2.63e-07;9 | |ontology_enrichment_celltype_v019=CL:0002494;1.04e-07;16!CL:0000499;1.23e-07;28!CL:0000327;2.01e-07;15!CL:0000153;2.57e-07;9!CL:0000447;2.57e-07;9!CL:0000188;2.63e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.39e-11,76;CL:0000393,2.54e-09,61;CL:0000211,2.54e-09,61;CL:0000680,2.43e-08,58;CL:0000056,2.43e-08,58;CL:0000355,2.43e-08,58;CL:0000499,5.66e-08,28;CL:0000187,8.71e-08,55;CL:0002494,1.16e-07,16;CL:0000327,1.17e-07,15;CL:0000153,1.69e-07,9;CL:0000447,1.69e-07,9;CL:0000188,2.14e-07,9;CL:0000048,3.17e-07,427 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.99e-18!365;UBERON:0000481!9.12e-15!347;UBERON:0005256!6.64e-12!143;UBERON:0002100!1.76e-11!216;UBERON:0000119!2.79e-11!312;UBERON:0000483!6.35e-11!309;UBERON:0001134!2.90e-09!61;UBERON:0002036!2.90e-09!61;UBERON:0003082!2.90e-09!61;UBERON:0002385!2.99e-09!63;UBERON:0001015!2.99e-09!63;UBERON:0000383!2.99e-09!63;UBERON:0004290!1.43e-08!70;UBERON:0000468!2.03e-08!659;UBERON:0000914!3.18e-08!83;UBERON:0002329!3.18e-08!83;UBERON:0003077!3.18e-08!83;UBERON:0003059!3.18e-08!83;UBERON:0007282!3.18e-08!83;UBERON:0009618!3.18e-08!83;UBERON:0007285!3.18e-08!83;UBERON:0003104!1.79e-07!238;UBERON:0009142!1.79e-07!238;UBERON:0000490!5.50e-07!138;UBERON:0002417!6.13e-07!61;UBERON:0000916!6.13e-07!61 | |ontology_enrichment_uberon=UBERON:0000475!4.99e-18!365;UBERON:0000481!9.12e-15!347;UBERON:0005256!6.64e-12!143;UBERON:0002100!1.76e-11!216;UBERON:0000119!2.79e-11!312;UBERON:0000483!6.35e-11!309;UBERON:0001134!2.90e-09!61;UBERON:0002036!2.90e-09!61;UBERON:0003082!2.90e-09!61;UBERON:0002385!2.99e-09!63;UBERON:0001015!2.99e-09!63;UBERON:0000383!2.99e-09!63;UBERON:0004290!1.43e-08!70;UBERON:0000468!2.03e-08!659;UBERON:0000914!3.18e-08!83;UBERON:0002329!3.18e-08!83;UBERON:0003077!3.18e-08!83;UBERON:0003059!3.18e-08!83;UBERON:0007282!3.18e-08!83;UBERON:0009618!3.18e-08!83;UBERON:0007285!3.18e-08!83;UBERON:0003104!1.79e-07!238;UBERON:0009142!1.79e-07!238;UBERON:0000490!5.50e-07!138;UBERON:0002417!6.13e-07!61;UBERON:0000916!6.13e-07!61 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.74e-11,160;UBERON:0009142,1.74e-11,160;UBERON:0002100,9.16e-10,199;UBERON:0005256,1.19e-09,122;UBERON:0001134,4.37e-08,62;UBERON:0002036,4.37e-08,62;UBERON:0003082,4.37e-08,62;UBERON:0007524,1.59e-07,73;UBERON:0007503,1.63e-07,78;UBERON:0002385,1.75e-07,64;UBERON:0001015,1.75e-07,64;UBERON:0000383,1.75e-07,64;UBERON:0002329,2.02e-07,71;UBERON:0003059,2.02e-07,71;UBERON:0007282,2.02e-07,71;UBERON:0004290,2.02e-07,71;UBERON:0009618,2.02e-07,71;UBERON:0003077,3.70e-07,72;UBERON:0007285,3.70e-07,72 | |||
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| ||
|short_description=p4@GPC6 | |short_description=p4@GPC6 | ||
}} | }} |
Revision as of 04:20, 20 November 2012
Short description: | p4@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GPC6_5end |
Coexpression cluster: | C1192_extraskeletal_Cardiac_Lens_cholangiocellular_pineal_Fibroblast_rectum |
Association with transcript: | 101bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.39e-11 | 76 |
electrically responsive cell | 2.54e-09 | 61 |
electrically active cell | 2.54e-09 | 61 |
muscle precursor cell | 2.43e-08 | 58 |
myoblast | 2.43e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.43e-08 | 58 |
stromal cell | 5.66e-08 | 28 |
muscle cell | 8.71e-08 | 55 |
cardiocyte | 1.16e-07 | 16 |
extracellular matrix secreting cell | 1.17e-07 | 15 |
GAG secreting cell | 1.69e-07 | 9 |
carbohydrate secreting cell | 1.69e-07 | 9 |
cell of skeletal muscle | 2.14e-07 | 9 |
multi fate stem cell | 3.17e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.74e-11 | 160 |
entire embryonic mesenchyme | 1.74e-11 | 160 |
trunk | 9.16e-10 | 199 |
trunk mesenchyme | 1.19e-09 | 122 |
skeletal muscle tissue | 4.37e-08 | 62 |
striated muscle tissue | 4.37e-08 | 62 |
myotome | 4.37e-08 | 62 |
dense mesenchyme tissue | 1.59e-07 | 73 |
epithelial vesicle | 1.63e-07 | 78 |
muscle tissue | 1.75e-07 | 64 |
musculature | 1.75e-07 | 64 |
musculature of body | 1.75e-07 | 64 |
somite | 2.02e-07 | 71 |
presomitic mesoderm | 2.02e-07 | 71 |
presumptive segmental plate | 2.02e-07 | 71 |
dermomyotome | 2.02e-07 | 71 |
trunk paraxial mesoderm | 2.02e-07 | 71 |
paraxial mesoderm | 3.70e-07 | 72 |
presumptive paraxial mesoderm | 3.70e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.