FFCP PHASE1:Hg19::chr19:10531150..10531237,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000988!1.82e-15!182;CL:0000037!1.74e-14!172;CL:0000566!1.74e-14!172;CL:0002032!1.01e-13!165;CL:0000837!1.01e-13!165;CL:0000763!1.41e-12!112;CL:0000049!1.41e-12!112;CL:0000738!2.20e-10!140;CL:0000557!9.61e-09!71;CL:0002031!1.82e-08!124;CL:0002087!1.86e-08!119;CL:0002009!8.35e-08!65;CL:0000990!4.20e-07!8;CL:0000839!7.10e-07!70;CL:0002194!7.14e-07!63;CL:0000576!7.14e-07!63;CL:0000040!7.14e-07!63;CL:0000559!7.14e-07!63 | |ontology_enrichment_celltype=CL:0000988!1.82e-15!182;CL:0000037!1.74e-14!172;CL:0000566!1.74e-14!172;CL:0002032!1.01e-13!165;CL:0000837!1.01e-13!165;CL:0000763!1.41e-12!112;CL:0000049!1.41e-12!112;CL:0000738!2.20e-10!140;CL:0000557!9.61e-09!71;CL:0002031!1.82e-08!124;CL:0002087!1.86e-08!119;CL:0002009!8.35e-08!65;CL:0000990!4.20e-07!8;CL:0000839!7.10e-07!70;CL:0002194!7.14e-07!63;CL:0000576!7.14e-07!63;CL:0000040!7.14e-07!63;CL:0000559!7.14e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000990;2.26e-10;8!CL:0000451;9.24e-10;10!CL:0000453;4.14e-08;5!CL:0000840;8.63e-07;5 | |ontology_enrichment_celltype_v019=CL:0000990;2.26e-10;8!CL:0000451;9.24e-10;10!CL:0000453;4.14e-08;5!CL:0000840;8.63e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.71e-17,177;CL:0000037,3.53e-15,168;CL:0002032,1.46e-14,161;CL:0000837,1.46e-14,161;CL:0000763,7.85e-14,108;CL:0000049,7.85e-14,108;CL:0000990,2.37e-10,8;CL:0000451,8.38e-10,10;CL:0000738,1.45e-08,136;CL:0000453,4.07e-08,5;CL:0000840,9.19e-07,5;CL:0001029,9.19e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51 | |ontology_enrichment_disease=DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.00e-10;39!DOID:2531;1.68e-09;51!DOID:0060083;1.68e-09;51!DOID:8692;3.18e-08;31!DOID:171;8.25e-07;10 | |ontology_enrichment_disease_v019=DOID:1240;5.00e-10;39!DOID:2531;1.68e-09;51!DOID:0060083;1.68e-09;51!DOID:8692;3.18e-08;31!DOID:171;8.25e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,5.24e-14,51;DOID:0060083,5.24e-14,51;DOID:1240,2.36e-12,39;DOID:8692,2.82e-08,31;DOID:171,6.53e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.34e-14!94;UBERON:0001016!1.34e-14!94;UBERON:0005743!7.06e-14!86;UBERON:0001017!1.14e-13!82;UBERON:0000955!1.17e-13!69;UBERON:0006238!1.17e-13!69;UBERON:0001893!3.34e-13!34;UBERON:0001869!3.82e-13!32;UBERON:0002020!1.24e-12!34;UBERON:0003528!1.24e-12!34;UBERON:0002780!1.29e-12!41;UBERON:0001890!1.29e-12!41;UBERON:0006240!1.29e-12!41;UBERON:0002791!1.52e-12!33;UBERON:0003080!5.85e-12!42;UBERON:0001950!1.68e-11!20;UBERON:0002619!4.25e-11!22;UBERON:0002616!7.84e-11!59;UBERON:0001049!2.27e-10!57;UBERON:0005068!2.27e-10!57;UBERON:0006241!2.27e-10!57;UBERON:0007135!2.27e-10!57;UBERON:0000956!3.11e-09!25;UBERON:0000203!3.11e-09!25;UBERON:0002346!1.06e-08!90;UBERON:0001474!4.50e-08!86;UBERON:0002390!1.35e-07!102;UBERON:0003061!1.35e-07!102;UBERON:0003056!1.61e-07!61;UBERON:0003075!2.50e-07!86;UBERON:0007284!2.50e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!1.34e-14!94;UBERON:0001016!1.34e-14!94;UBERON:0005743!7.06e-14!86;UBERON:0001017!1.14e-13!82;UBERON:0000955!1.17e-13!69;UBERON:0006238!1.17e-13!69;UBERON:0001893!3.34e-13!34;UBERON:0001869!3.82e-13!32;UBERON:0002020!1.24e-12!34;UBERON:0003528!1.24e-12!34;UBERON:0002780!1.29e-12!41;UBERON:0001890!1.29e-12!41;UBERON:0006240!1.29e-12!41;UBERON:0002791!1.52e-12!33;UBERON:0003080!5.85e-12!42;UBERON:0001950!1.68e-11!20;UBERON:0002619!4.25e-11!22;UBERON:0002616!7.84e-11!59;UBERON:0001049!2.27e-10!57;UBERON:0005068!2.27e-10!57;UBERON:0006241!2.27e-10!57;UBERON:0007135!2.27e-10!57;UBERON:0000956!3.11e-09!25;UBERON:0000203!3.11e-09!25;UBERON:0002346!1.06e-08!90;UBERON:0001474!4.50e-08!86;UBERON:0002390!1.35e-07!102;UBERON:0003061!1.35e-07!102;UBERON:0003056!1.61e-07!61;UBERON:0003075!2.50e-07!86;UBERON:0007284!2.50e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.80e-16;32!UBERON:0002619;2.05e-15;22!UBERON:0001950;2.23e-15;20!UBERON:0001893;4.05e-15;34!UBERON:0002791;5.13e-15;32!UBERON:0003528;2.06e-13;34!UBERON:0002020;2.06e-13;34!UBERON:0000956;5.87e-13;25!UBERON:0000203;5.87e-13;25!UBERON:0002780;2.68e-12;41!UBERON:0001890;2.68e-12;41!UBERON:0000200;1.05e-08;6!UBERON:0000955;5.54e-07;68!UBERON:0001017;9.48e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.80e-16;32!UBERON:0002619;2.05e-15;22!UBERON:0001950;2.23e-15;20!UBERON:0001893;4.05e-15;34!UBERON:0002791;5.13e-15;32!UBERON:0003528;2.06e-13;34!UBERON:0002020;2.06e-13;34!UBERON:0000956;5.87e-13;25!UBERON:0000203;5.87e-13;25!UBERON:0002780;2.68e-12;41!UBERON:0001890;2.68e-12;41!UBERON:0000200;1.05e-08;6!UBERON:0000955;5.54e-07;68!UBERON:0001017;9.48e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.47e-18,32;UBERON:0001893,8.15e-17,34;UBERON:0002780,1.61e-16,41;UBERON:0001890,1.61e-16,41;UBERON:0003080,1.61e-16,41;UBERON:0006240,1.61e-16,41;UBERON:0002791,1.88e-16,32;UBERON:0002619,1.84e-15,22;UBERON:0001950,1.92e-15,20;UBERON:0003528,4.52e-15,34;UBERON:0002020,4.52e-15,34;UBERON:0000956,5.33e-13,25;UBERON:0000203,5.33e-13,25;UBERON:0000955,2.15e-11,68;UBERON:0006238,2.15e-11,68;UBERON:0000073,6.10e-11,53;UBERON:0002616,6.10e-11,53;UBERON:0001016,1.90e-10,89;UBERON:0001049,6.10e-10,56;UBERON:0005068,6.10e-10,56;UBERON:0006241,6.10e-10,56;UBERON:0007135,6.10e-10,56;UBERON:0001017,1.70e-09,81;UBERON:0003056,2.35e-09,61;UBERON:0000200,1.09e-08,6;UBERON:0002346,8.06e-07,86 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,1.22866968250754,0,0,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,3.20936304141395,4.51553241974702,4.09296062831132,0,1.15148819429164,2.47705797305722,0,0,0,0.92960640696362,4.12290774213522,0,0.553995408531877,0.802177789880567,1.08505435357926,0,0,0.257575567634187,0.290796477559129,1.88937971844405,0.485168122375632,1.39457422143411,2.87817521615278,0.929119112685311,0,0.512321413058201,0.709446689665756,0.344745680736619,1.29096936716765,0,1.88242339542605,2.18324920046277,1.57306439111559,2.75475503133812,2.24650318953266,1.91801137739712,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,2.8369261234557,1.86846674698672,0.502497330513487,0,0.434377689410233,0.605399502633369,1.84138817993782,0.949387162322653,0.633765858935825,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,3.36305137788922,0,0.393419540227666,0,0.411202997999018,5.51715434789238,0,0,0,15.5974639639243,2.3568472597987,1.55073726208535,0.541607727530031,7.94166182299186,10.4047478047903,17.265979983386,17.6864011382943,19.7066098299836,0,0,0,16.7697827192398,0,0,0,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0,0,0.201606743224732,1.60464117470104,0.868946423296794,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,2.0956652079634,0,0,11.0346113842592,14.975157407737,15.0242495386318,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0,1.21085942115945,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.485618833104395,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0,0.113432183160021,0,0,0.635795703478686,0.600182192168805,0,0,0,0,0.292311015483596,0,0.0920498986422993,0,0.710019185033229,0.403008392910561,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.71181185733329,0,0,0,0,0,1.6462960453256,0,0,0,0,5.73902029239046,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0,0,0,1.47730203652438,9.12616634043027,5.94524649154913,0,0,0,0,0,0,0,0.528290604079356,1.86595303986695,0.864719720501769,1.00993946741104,0.126995788584338,0.381988425558278,0,0,0,0.300343057843917,0,1.79409734952577,2.61576041299968,1.6134422880609,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0,0,0,0,1.29964888536674,1.2162378064119,0,2.10833939483032,0,0,0,0,0.205476322550383,0,11.8810252633139,0.394061520403854,0,0.641715181398742,0.254094624222463,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.737476674166813,0,5.09083009403126,3.0882908142977,0.413536052245775,0.647142602455851,1.17400313583789,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,14.0101281172065,10.3136874900735,0,0.650060246036521,0,0.096670718292122,1.3864375540318,1.07452572308291,0.689182862422653,0.214840489736547,0.290033387828457,2.30111894023472,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,0,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0,1.52927441428475,0,0,0,0,0,0,15.7031384557386,0.962479855263359,0,6.31730795427444,8.51188356561025,0,6.21762463642407,4.19116680008915,0,0.211673582723883,1.94773164164733,0,11.868203309726,1.25343916618419,0,4.9094615562465,4.81764225311099,2.01799707191048,0,0,0,0,0,0,7.2385605212763,1.23087398947712,28.3978462399782,2.66457574398256,1.4098700508785,0,0.146508179271894,13.1069363489475,19.8369224013911,0,0,0,0,0.994147647766298,3.09472716103128,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0.251932747854276,0.715880777515084,0.615424027305347,0,0,0,0,0.197286811273867,0,0,3.87733098438087,8.34912883456661,7.98455192004777,0,0.349839999984783,0,0,0,0.236387681767936,0.689486746482929,11.6641845353302,0.520874984799877,6.20018970069687,11.6978545466646,0,0.331737779793674,0,3.72955175161753,0.32681539055697,0.278847488557207,0.0769502585037971,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,1.41282230755522,0.664846727600626,4.73750887296079,6.86218870112088,4.86682602229944,3.03605972358696,0.476809736941136,0.632994193584081,0,0,2.16388639742091,0,0,0,13.639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| ||
|short_description=p3@PDE4A | |short_description=p3@PDE4A | ||
}} | }} |
Revision as of 01:53, 20 November 2012
Short description: | p3@PDE4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PDE4A_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -95bp_to_ENST00000352831, NM_001111307, uc002moj.2_5end |
EntrezGene: | PDE4A |
HGNC: | 8780 |
UniProt: | P27815 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.71e-17 | 177 |
hematopoietic stem cell | 3.53e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.46e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-14 | 161 |
myeloid cell | 7.85e-14 | 108 |
common myeloid progenitor | 7.85e-14 | 108 |
conventional dendritic cell | 2.37e-10 | 8 |
dendritic cell | 8.38e-10 | 10 |
leukocyte | 1.45e-08 | 136 |
Langerhans cell | 4.07e-08 | 5 |
immature conventional dendritic cell | 9.19e-07 | 5 |
common dendritic progenitor | 9.19e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.47e-18 | 32 |
telencephalon | 8.15e-17 | 34 |
regional part of forebrain | 1.61e-16 | 41 |
forebrain | 1.61e-16 | 41 |
anterior neural tube | 1.61e-16 | 41 |
future forebrain | 1.61e-16 | 41 |
regional part of telencephalon | 1.88e-16 | 32 |
regional part of cerebral cortex | 1.84e-15 | 22 |
neocortex | 1.92e-15 | 20 |
brain grey matter | 4.52e-15 | 34 |
gray matter | 4.52e-15 | 34 |
cerebral cortex | 5.33e-13 | 25 |
pallium | 5.33e-13 | 25 |
brain | 2.15e-11 | 68 |
future brain | 2.15e-11 | 68 |
regional part of nervous system | 6.10e-11 | 53 |
regional part of brain | 6.10e-11 | 53 |
nervous system | 1.90e-10 | 89 |
neural tube | 6.10e-10 | 56 |
neural rod | 6.10e-10 | 56 |
future spinal cord | 6.10e-10 | 56 |
neural keel | 6.10e-10 | 56 |
central nervous system | 1.70e-09 | 81 |
pre-chordal neural plate | 2.35e-09 | 61 |
gyrus | 1.09e-08 | 6 |
neurectoderm | 8.06e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.24e-14 | 51 |
immune system cancer | 5.24e-14 | 51 |
leukemia | 2.36e-12 | 39 |
myeloid leukemia | 2.82e-08 | 31 |
neuroectodermal tumor | 6.53e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.