FFCP PHASE1:Hg19::chr14:22433675..22433678,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!2.22e-45!18;CL:0000789!2.22e-45!18;CL:0002420!2.22e-45!18;CL:0002419!2.22e-45!18;CL:0000790!2.22e-45!18;CL:0000084!2.25e-36!25;CL:0000827!2.25e-36!25;CL:0000624!3.45e-26!6;CL:0000838!6.22e-26!52;CL:0000542!2.34e-25!53;CL:0000051!2.34e-25!53;CL:0000625!7.48e-25!11;CL:0000898!2.30e-14!3;CL:0002087!9.50e-14!119;CL:0000623!3.36e-13!3;CL:0000825!3.36e-13!3;CL:0000738!3.31e-12!140;CL:0002031!1.84e-10!124;CL:0000815!5.75e-10!2;CL:0000792!5.75e-10!2;CL:0002677!5.75e-10!2;CL:0000037!5.90e-09!172;CL:0000566!5.90e-09!172;CL:0000988!3.52e-08!182;CL:0002032!9.34e-07!165;CL:0000837!9.34e-07!165 | |ontology_enrichment_celltype=CL:0000791!2.22e-45!18;CL:0000789!2.22e-45!18;CL:0002420!2.22e-45!18;CL:0002419!2.22e-45!18;CL:0000790!2.22e-45!18;CL:0000084!2.25e-36!25;CL:0000827!2.25e-36!25;CL:0000624!3.45e-26!6;CL:0000838!6.22e-26!52;CL:0000542!2.34e-25!53;CL:0000051!2.34e-25!53;CL:0000625!7.48e-25!11;CL:0000898!2.30e-14!3;CL:0002087!9.50e-14!119;CL:0000623!3.36e-13!3;CL:0000825!3.36e-13!3;CL:0000738!3.31e-12!140;CL:0002031!1.84e-10!124;CL:0000815!5.75e-10!2;CL:0000792!5.75e-10!2;CL:0002677!5.75e-10!2;CL:0000037!5.90e-09!172;CL:0000566!5.90e-09!172;CL:0000988!3.52e-08!182;CL:0002032!9.34e-07!165;CL:0000837!9.34e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000895;4.22e-21;1!CL:0000898;6.34e-08;3 | |ontology_enrichment_celltype_v019=CL:0000895;4.22e-21;1!CL:0000898;6.34e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000810,5.16e-21,1;CL:0000895,5.16e-21,1;CL:0002436,5.16e-21,1;CL:0002427,5.16e-21,1;CL:0002428,5.16e-21,1;CL:0002429,5.16e-21,1;CL:0002433,5.16e-21,1;CL:0002431,5.16e-21,1;CL:0002432,5.16e-21,1;CL:0000893,3.35e-11,2;CL:0002489,3.35e-11,2;CL:0000809,3.35e-11,2;CL:0000808,3.35e-11,2;CL:0000894,3.35e-11,2;CL:0000806,3.35e-11,2;CL:0000807,3.35e-11,2;CL:0000805,3.35e-11,2;CL:0002425,3.35e-11,2;CL:0000898,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002427;4.22e-21;1!CL:0002425;3.02e-11;2 | |ontology_enrichment_development_v019=CL:0002427;4.22e-21;1!CL:0002425;3.02e-11;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.06e-10!4;UBERON:0005058!1.06e-10!4;UBERON:0009113!1.06e-10!4;UBERON:0003295!1.06e-10!4;UBERON:0005562!1.06e-10!4;UBERON:0003408!2.35e-07!10;UBERON:0003351!2.84e-07!6 | |ontology_enrichment_uberon=UBERON:0002370!1.06e-10!4;UBERON:0005058!1.06e-10!4;UBERON:0009113!1.06e-10!4;UBERON:0003295!1.06e-10!4;UBERON:0005562!1.06e-10!4;UBERON:0003408!2.35e-07!10;UBERON:0003351!2.84e-07!6 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@TRAV12-3 | |short_description=p4@TRAV12-3 | ||
}} | }} |
Revision as of 00:20, 20 November 2012
Short description: | p4@TRAV12-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TRAV12-3_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | -1bp_to_ENST00000390442_5end |
EntrezGene: | NA |
HGNC: | 12107 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 5.16e-21 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.16e-21 | 1 |
mature CD4 single-positive thymocyte | 5.16e-21 | 1 |
resting double-positive thymocyte | 5.16e-21 | 1 |
double-positive blast | 5.16e-21 | 1 |
CD69-positive double-positive thymocyte | 5.16e-21 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.16e-21 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.16e-21 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.16e-21 | 1 |
thymocyte | 3.35e-11 | 2 |
double negative thymocyte | 3.35e-11 | 2 |
double-positive, alpha-beta thymocyte | 3.35e-11 | 2 |
DN4 thymocyte | 3.35e-11 | 2 |
DN1 thymic pro-T cell | 3.35e-11 | 2 |
DN2 thymocyte | 3.35e-11 | 2 |
DN3 thymocyte | 3.35e-11 | 2 |
immature single positive thymocyte | 3.35e-11 | 2 |
early T lineage precursor | 3.35e-11 | 2 |
naive T cell | 6.78e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.