FFCP PHASE1:Hg19::chr15:31523055..31523071,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000945!5.15e-70!24;CL:0000826!5.15e-70!24;CL:0000236!8.55e-42!14;CL:0000542!2.35e-31!53;CL:0000051!2.35e-31!53;CL:0000838!4.31e-29!52;CL:0002087!4.49e-14!119;CL:0000738!5.08e-11!140;CL:0002031!6.67e-11!124;CL:0000785!1.44e-08!2;CL:0000955!1.44e-08!2;CL:0000818!1.44e-08!2;CL:0000954!1.44e-08!2;CL:0000816!1.44e-08!2;CL:0000037!7.61e-08!172;CL:0000566!7.61e-08!172;CL:0002032!1.25e-07!165;CL:0000837!1.25e-07!165;CL:0000988!4.29e-07!182 | |ontology_enrichment_celltype=CL:0000945!5.15e-70!24;CL:0000826!5.15e-70!24;CL:0000236!8.55e-42!14;CL:0000542!2.35e-31!53;CL:0000051!2.35e-31!53;CL:0000838!4.31e-29!52;CL:0002087!4.49e-14!119;CL:0000738!5.08e-11!140;CL:0002031!6.67e-11!124;CL:0000785!1.44e-08!2;CL:0000955!1.44e-08!2;CL:0000818!1.44e-08!2;CL:0000954!1.44e-08!2;CL:0000816!1.44e-08!2;CL:0000037!7.61e-08!172;CL:0000566!7.61e-08!172;CL:0002032!1.25e-07!165;CL:0000837!1.25e-07!165;CL:0000988!4.29e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.84e-112;24!CL:0000236;8.03e-56;13!CL:0000542;6.87e-33;53!CL:0000946;1.60e-09;1!CL:0000786;1.60e-09;1!CL:0002087;6.04e-08;104 | |ontology_enrichment_celltype_v019=CL:0000945;4.84e-112;24!CL:0000236;8.03e-56;13!CL:0000542;6.87e-33;53!CL:0000946;1.60e-09;1!CL:0000786;1.60e-09;1!CL:0002087;6.04e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.96e-112,24;CL:0000826,2.96e-112,24;CL:0000236,2.78e-63,14;CL:0000542,1.37e-54,53;CL:0000051,1.37e-54,53;CL:0000838,4.39e-50,52;CL:0002087,4.70e-23,115;CL:0002031,1.33e-19,120;CL:0000738,5.65e-19,136;CL:0002032,1.72e-15,161;CL:0000837,1.72e-15,161;CL:0000037,1.06e-14,168;CL:0000988,8.99e-14,177;CL:0000946,1.60e-09,1;CL:0000786,1.60e-09,1;CL:0000980,1.60e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;6.87e-33;53!UBERON:0001045;4.54e-09;1 | |ontology_enrichment_development_v019=CL:0000051;6.87e-33;53!UBERON:0001045;4.54e-09;1 | ||
|ontology_enrichment_disease=DOID:0060058!6.70e-13!10 | |ontology_enrichment_disease=DOID:0060058!6.70e-13!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.77e-13;10!DOID:630;1.81e-09;1!DOID:0050177;1.81e-09;1!DOID:0050427;1.81e-09;1!DOID:12603;4.54e-09;1 | |ontology_enrichment_disease_v019=DOID:0060058;4.77e-13;10!DOID:630;1.81e-09;1!DOID:0050177;1.81e-09;1!DOID:0050427;1.81e-09;1!DOID:12603;4.54e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.85e-13,10;DOID:630,1.74e-09,1;DOID:0050177,1.74e-09,1;DOID:0050427,1.74e-09,1;DOID:12603,4.91e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.80e-15!115;UBERON:0004177!2.37e-12!7;UBERON:0002106!8.66e-12!3;UBERON:0004854!8.66e-12!3;UBERON:0009034!8.66e-12!3;UBERON:0002095!8.66e-12!3;UBERON:0004782!8.66e-12!3;UBERON:0003281!8.66e-12!3;UBERON:0009664!8.66e-12!3;UBERON:0002296!8.66e-12!3;UBERON:0005602!8.66e-12!3;UBERON:0001179!8.66e-12!3;UBERON:0006293!8.66e-12!3 | |ontology_enrichment_uberon=UBERON:0007023!7.80e-15!115;UBERON:0004177!2.37e-12!7;UBERON:0002106!8.66e-12!3;UBERON:0004854!8.66e-12!3;UBERON:0009034!8.66e-12!3;UBERON:0002095!8.66e-12!3;UBERON:0004782!8.66e-12!3;UBERON:0003281!8.66e-12!3;UBERON:0009664!8.66e-12!3;UBERON:0002296!8.66e-12!3;UBERON:0005602!8.66e-12!3;UBERON:0001179!8.66e-12!3;UBERON:0006293!8.66e-12!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.57e-11;3!UBERON:0002372;3.31e-09;1!UBERON:0001961;3.31e-09;1!UBERON:0001744;3.31e-09;1!UBERON:0001042;3.31e-09;1!UBERON:0001735;3.31e-09;1!UBERON:0001154;4.54e-09;1!UBERON:0001153;4.54e-09;1!UBERON:0009854;4.54e-09;1!UBERON:0000029;8.16e-09;1!UBERON:0004177;2.97e-07;5!UBERON:0005057;2.97e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.57e-11;3!UBERON:0002372;3.31e-09;1!UBERON:0001961;3.31e-09;1!UBERON:0001744;3.31e-09;1!UBERON:0001042;3.31e-09;1!UBERON:0001735;3.31e-09;1!UBERON:0001154;4.54e-09;1!UBERON:0001153;4.54e-09;1!UBERON:0009854;4.54e-09;1!UBERON:0000029;8.16e-09;1!UBERON:0004177;2.97e-07;5!UBERON:0005057;2.97e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.66e-11,3;UBERON:0004854,1.66e-11,3;UBERON:0009034,1.66e-11,3;UBERON:0002095,1.66e-11,3;UBERON:0004782,1.66e-11,3;UBERON:0003281,1.66e-11,3;UBERON:0009664,1.66e-11,3;UBERON:0002296,1.66e-11,3;UBERON:0005602,1.66e-11,3;UBERON:0001179,1.66e-11,3;UBERON:0006293,1.66e-11,3;UBERON:0002372,3.31e-09,1;UBERON:0001961,3.31e-09,1;UBERON:0001744,3.31e-09,1;UBERON:0001735,3.31e-09,1;UBERON:0001154,5.31e-09,1;UBERON:0001153,5.31e-09,1;UBERON:0001045,5.31e-09,1;UBERON:0000029,7.85e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,4.26923065139718,2.59745578335141,0,0,0,0,0,0,8.05658886035137,20.1880310132139,0,0,0,0,0,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,1.20118796110804,2.29900975981793,2.64417949113945,1.90810750907073,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,2.22963810150862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,2.21027132424918,0,0,16.3702791263222,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0.828478110694391,1.48849806543585,0,19.9739861344669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1620314987116,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,3.47740496525458,0.386747327841463,11.293350619517,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0.12729431655633,0,0,0,3.70436291580231,1.07583308089015,0,0,0,0,0,0,0,0,0,0.603821380773079,20.1958150151037 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89708369314551,4.26923065139718,2.59745578335141,0,0,0,0,0,0,8.05658886035137,20.1880310132139,0,0,0,0,0,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,1.28019066769952,1.20118796110804,2.29900975981793,2.64417949113945,1.90810750907073,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,2.22963810150862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,2.21027132424918,0,0,16.3702791263222,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0.828478110694391,1.48849806543585,0,19.9739861344669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1620314987116,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,3.47740496525458,0.386747327841463,11.293350619517,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0.129177819672012,0.124149428591716,0,0.12729431655633,0,0,0,3.70436291580231,1.07583308089015,0,0,0,0,0,0,0,0,0,0.603821380773079,20.1958150151037 | ||
|short_description=p1@LOC283710 | |short_description=p1@LOC283710 | ||
}} | }} |
Revision as of 22:53, 19 November 2012
Short description: | p1@LOC283710 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC283710_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_NM_001243538_5end |
EntrezGene: | LOC283710 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.96e-112 | 24 |
pro-B cell | 2.96e-112 | 24 |
B cell | 2.78e-63 | 14 |
lymphocyte | 1.37e-54 | 53 |
common lymphoid progenitor | 1.37e-54 | 53 |
lymphoid lineage restricted progenitor cell | 4.39e-50 | 52 |
nongranular leukocyte | 4.70e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 1.33e-19 | 120 |
leukocyte | 5.65e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.72e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-15 | 161 |
hematopoietic stem cell | 1.06e-14 | 168 |
hematopoietic cell | 8.99e-14 | 177 |
antibody secreting cell | 1.60e-09 | 1 |
plasma cell | 1.60e-09 | 1 |
plasmablast | 1.60e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.66e-11 | 3 |
gastrointestinal system mesentery | 1.66e-11 | 3 |
stomach region | 1.66e-11 | 3 |
mesentery | 1.66e-11 | 3 |
gastrointestinal system serosa | 1.66e-11 | 3 |
mesentery of stomach | 1.66e-11 | 3 |
gut mesentery | 1.66e-11 | 3 |
dorsal mesentery | 1.66e-11 | 3 |
dorsal mesogastrium | 1.66e-11 | 3 |
peritoneal cavity | 1.66e-11 | 3 |
spleen primordium | 1.66e-11 | 3 |
tonsil | 3.31e-09 | 1 |
mucosa-associated lymphoid tissue | 3.31e-09 | 1 |
lymphoid tissue | 3.31e-09 | 1 |
tonsillar ring | 3.31e-09 | 1 |
vermiform appendix | 5.31e-09 | 1 |
caecum | 5.31e-09 | 1 |
midgut | 5.31e-09 | 1 |
lymph node | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.85e-13 | 10 |
genetic disease | 1.74e-09 | 1 |
monogenic disease | 1.74e-09 | 1 |
xeroderma pigmentosum | 1.74e-09 | 1 |
acute leukemia | 4.91e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.