FFCP PHASE1:Hg19::chr3:112316658..112316667,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!7.23e-14!75;CL:0002620!4.58e-13!23;CL:0002334!1.09e-10!12;CL:0000055!3.82e-10!180;CL:0000136!2.68e-07!15;CL:1000306!4.62e-07!4;CL:0002547!4.62e-07!4 | |ontology_enrichment_celltype=CL:0000057!7.23e-14!75;CL:0002620!4.58e-13!23;CL:0002334!1.09e-10!12;CL:0000055!3.82e-10!180;CL:0000136!2.68e-07!15;CL:1000306!4.62e-07!4;CL:0002547!4.62e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.69e-17;9!CL:0000447;2.69e-17;9!CL:0002561;2.10e-13;2!CL:0002559;9.27e-12;5!CL:0000327;2.65e-10;15!CL:0000499;4.15e-10;28!CL:0000138;6.97e-10;6!CL:0002615;9.51e-10;3!CL:0000214;1.73e-09;3!CL:0000135;3.11e-09;3!CL:0000388;3.11e-09;3!CL:0000136;3.36e-08;13!CL:0002616;4.27e-08;1!CL:0002581;1.53e-07;1!CL:1000306;2.32e-07;4!CL:0002547;2.32e-07;4 | |ontology_enrichment_celltype_v019=CL:0000153;2.69e-17;9!CL:0000447;2.69e-17;9!CL:0002561;2.10e-13;2!CL:0002559;9.27e-12;5!CL:0000327;2.65e-10;15!CL:0000499;4.15e-10;28!CL:0000138;6.97e-10;6!CL:0002615;9.51e-10;3!CL:0000214;1.73e-09;3!CL:0000135;3.11e-09;3!CL:0000388;3.11e-09;3!CL:0000136;3.36e-08;13!CL:0002616;4.27e-08;1!CL:0002581;1.53e-07;1!CL:1000306;2.32e-07;4!CL:0002547;2.32e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.40e-17,9;CL:0000447,2.40e-17,9;CL:0002561,1.19e-13,2;CL:0002559,7.59e-12,5;CL:0000327,2.48e-10,15;CL:0000499,3.84e-10,28;CL:0000058,6.68e-10,6;CL:0000138,6.68e-10,6;CL:0002615,1.04e-09,3;CL:0000214,1.59e-09,3;CL:0000135,2.87e-09,3;CL:0000388,2.87e-09,3;CL:0002616,4.28e-08,1;CL:0002581,1.39e-07,1;CL:1000306,3.18e-07,4;CL:0002547,3.18e-07,4;CL:0000136,4.00e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!2.50e-08!5;DOID:450!2.50e-08!5;DOID:66!2.50e-08!5;DOID:423!2.50e-08!5;DOID:0080000!2.50e-08!5;DOID:11722!2.50e-08!5 | |ontology_enrichment_disease=DOID:17!2.50e-08!5;DOID:450!2.50e-08!5;DOID:66!2.50e-08!5;DOID:423!2.50e-08!5;DOID:0080000!2.50e-08!5;DOID:11722!2.50e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.11e-09;3!DOID:127;3.11e-09;3!DOID:0060072;3.94e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;3.11e-09;3!DOID:127;3.11e-09;3!DOID:0060072;3.94e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.26e-09,3;DOID:127,3.26e-09,3;DOID:0060072,4.08e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.30e-11!45;UBERON:0002416!1.30e-11!45;UBERON:0002097!3.40e-10!40;UBERON:0004457!4.61e-08!12;UBERON:0000042!4.61e-08!12;UBERON:0003102!1.09e-07!95;UBERON:0003688!1.53e-07!6;UBERON:0002358!1.53e-07!6;UBERON:0003684!1.53e-07!6;UBERON:0001178!1.53e-07!6;UBERON:0000415!4.62e-07!4;UBERON:0007240!4.62e-07!4;UBERON:0005742!4.62e-07!4;UBERON:0005734!4.62e-07!4;UBERON:0004664!4.62e-07!4;UBERON:0004663!4.62e-07!4 | |ontology_enrichment_uberon=UBERON:0002199!1.30e-11!45;UBERON:0002416!1.30e-11!45;UBERON:0002097!3.40e-10!40;UBERON:0004457!4.61e-08!12;UBERON:0000042!4.61e-08!12;UBERON:0003102!1.09e-07!95;UBERON:0003688!1.53e-07!6;UBERON:0002358!1.53e-07!6;UBERON:0003684!1.53e-07!6;UBERON:0001178!1.53e-07!6;UBERON:0000415!4.62e-07!4;UBERON:0007240!4.62e-07!4;UBERON:0005742!4.62e-07!4;UBERON:0005734!4.62e-07!4;UBERON:0004664!4.62e-07!4;UBERON:0004663!4.62e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.64e-18;9!UBERON:0000042;5.64e-18;9!UBERON:0005406;6.04e-14;2!UBERON:0005933;2.10e-13;2!UBERON:0005942;2.10e-13;2!UBERON:0005932;2.10e-13;2!UBERON:0002073;9.27e-12;5!UBERON:0003688;1.71e-10;6!UBERON:0002358;1.71e-10;6!UBERON:0003684;1.71e-10;6!UBERON:0001178;1.71e-10;6!UBERON:0006915;1.73e-09;3!UBERON:0007616;1.73e-09;3!UBERON:0002217;1.73e-09;3!UBERON:0002018;1.73e-09;3!UBERON:0007846;3.11e-09;3!UBERON:0000043;3.11e-09;3!UBERON:0007845;3.11e-09;3!UBERON:0004905;1.15e-07;8!UBERON:0000982;1.15e-07;8!UBERON:0004770;1.15e-07;8!UBERON:0007195;1.53e-07;1!UBERON:0004797;2.32e-07;4!UBERON:0000415;2.32e-07;4!UBERON:0007240;2.32e-07;4!UBERON:0005742;2.32e-07;4!UBERON:0005734;2.32e-07;4!UBERON:0004664;2.32e-07;4!UBERON:0004663;2.32e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004457;5.64e-18;9!UBERON:0000042;5.64e-18;9!UBERON:0005406;6.04e-14;2!UBERON:0005933;2.10e-13;2!UBERON:0005942;2.10e-13;2!UBERON:0005932;2.10e-13;2!UBERON:0002073;9.27e-12;5!UBERON:0003688;1.71e-10;6!UBERON:0002358;1.71e-10;6!UBERON:0003684;1.71e-10;6!UBERON:0001178;1.71e-10;6!UBERON:0006915;1.73e-09;3!UBERON:0007616;1.73e-09;3!UBERON:0002217;1.73e-09;3!UBERON:0002018;1.73e-09;3!UBERON:0007846;3.11e-09;3!UBERON:0000043;3.11e-09;3!UBERON:0007845;3.11e-09;3!UBERON:0004905;1.15e-07;8!UBERON:0000982;1.15e-07;8!UBERON:0004770;1.15e-07;8!UBERON:0007195;1.53e-07;1!UBERON:0004797;2.32e-07;4!UBERON:0000415;2.32e-07;4!UBERON:0007240;2.32e-07;4!UBERON:0005742;2.32e-07;4!UBERON:0005734;2.32e-07;4!UBERON:0004664;2.32e-07;4!UBERON:0004663;2.32e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,5.52e-14,2;UBERON:0005933,1.19e-13,2;UBERON:0005942,1.19e-13,2;UBERON:0005932,1.19e-13,2;UBERON:0004457,1.96e-13,12;UBERON:0000042,1.96e-13,12;UBERON:0002073,7.59e-12,5;UBERON:0005086,7.59e-12,5;UBERON:0003688,1.80e-10,6;UBERON:0002358,1.80e-10,6;UBERON:0003684,1.80e-10,6;UBERON:0001178,1.80e-10,6;UBERON:0006915,1.59e-09,3;UBERON:0007616,1.59e-09,3;UBERON:0002217,1.59e-09,3;UBERON:0002018,1.59e-09,3;UBERON:0007846,2.87e-09,3;UBERON:0000043,2.87e-09,3;UBERON:0007845,2.87e-09,3;UBERON:0004905,1.43e-07,8;UBERON:0000982,1.43e-07,8;UBERON:0004770,1.43e-07,8;UBERON:0007195,2.31e-07,1;UBERON:0000415,3.18e-07,4;UBERON:0007240,3.18e-07,4;UBERON:0005742,3.18e-07,4;UBERON:0005734,3.18e-07,4;UBERON:0004664,3.18e-07,4;UBERON:0004663,3.18e-07,4 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.563817616383885,2.00146596706261,2.23480547213644,5.23403114460221,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,1.0843174571537,1.50401373190767,1.59331170856906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.529636723252875,3.15520282823695,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351170855109,0.85422955527427,0.423863802319124,1.80054657650641,0.309157587715317,0.515281080091258,1.48893485065272,0.337552664482532,0.194874010322397,0.252433774244115,0.276149695926898,0.646584227275248,2.4850671476163,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,0.207970861530807,0.535286966391485,0,0.468565659970853,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.896974044789907,0,3.69964018630297,1.48418066444991,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,1.88887408098384,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.233713309847224,0.554805861502613,0.378806010550178,1.0062716070103,0.889811221596536,0.457680136793847,1.36107831386915,0,0.443565449968902,0,0,0,0,1.86089200190596,0,0.601030435988874,0.761610424337591,0,0.181848659202559,0.214821114084977,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0.358177682162975,0,0.657852148736121,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,1.11598505450025,0.924351257262837,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0.404234377916439,0,0.684466602170562,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr3:112316658..112316667,- | |short_description=p@chr3:112316658..112316667,- | ||
}} | }} |
Revision as of 19:41, 19 November 2012
Short description: | p@chr3:112316658..112316667, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:112316658..112316667, - |
Coexpression cluster: | C1078_Cardiac_Preadipocyte_Fibroblast_Chondrocyte_Synoviocyte_Ewing_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.40e-17 | 9 |
carbohydrate secreting cell | 2.40e-17 | 9 |
outer root sheath cell | 1.19e-13 | 2 |
hair follicle cell | 7.59e-12 | 5 |
extracellular matrix secreting cell | 2.48e-10 | 15 |
stromal cell | 3.84e-10 | 28 |
chondroblast | 6.68e-10 | 6 |
chondrocyte | 6.68e-10 | 6 |
adipocyte of omentum tissue | 1.04e-09 | 3 |
synovial cell | 1.59e-09 | 3 |
fibrocyte | 2.87e-09 | 3 |
tendon cell | 2.87e-09 | 3 |
perirenal adipocyte cell | 4.28e-08 | 1 |
perirenal preadipocyte | 1.39e-07 | 1 |
fibroblast of tunica adventitia of artery | 3.18e-07 | 4 |
fibroblast of the aortic adventitia | 3.18e-07 | 4 |
fat cell | 4.00e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 5.52e-14 | 2 |
hair root sheath | 1.19e-13 | 2 |
hair outer root sheath | 1.19e-13 | 2 |
bulb of hair follicle | 1.19e-13 | 2 |
cavity lining | 1.96e-13 | 12 |
serous membrane | 1.96e-13 | 12 |
hair follicle | 7.59e-12 | 5 |
hair follicle placode | 7.59e-12 | 5 |
omentum | 1.80e-10 | 6 |
peritoneum | 1.80e-10 | 6 |
abdominal cavity | 1.80e-10 | 6 |
visceral peritoneum | 1.80e-10 | 6 |
stratified squamous epithelium | 1.59e-09 | 3 |
layer of synovial tissue | 1.59e-09 | 3 |
synovial joint | 1.59e-09 | 3 |
synovial membrane of synovial joint | 1.59e-09 | 3 |
dense regular connective tissue | 2.87e-09 | 3 |
tendon | 2.87e-09 | 3 |
regular connective tissue | 2.87e-09 | 3 |
articulation | 1.43e-07 | 8 |
skeletal joint | 1.43e-07 | 8 |
articular system | 1.43e-07 | 8 |
stroma of bone marrow | 2.31e-07 | 1 |
artery wall | 3.18e-07 | 4 |
tunica adventitia of artery | 3.18e-07 | 4 |
adventitia | 3.18e-07 | 4 |
tunica adventitia of blood vessel | 3.18e-07 | 4 |
aorta tunica adventitia | 3.18e-07 | 4 |
aorta wall | 3.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.26e-09 | 3 |
leiomyoma | 3.26e-09 | 3 |
benign neoplasm | 4.08e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.