FFCP PHASE1:Hg19::chr5:77944425..77944442,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!4.61e-13!180;CL:0002321!3.43e-12!248;CL:0000220!1.39e-11!246;CL:0000222!4.91e-11!119;CL:0000133!1.23e-07!59;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | |ontology_enrichment_celltype=CL:0000055!4.61e-13!180;CL:0002321!3.43e-12!248;CL:0000220!1.39e-11!246;CL:0000222!4.91e-11!119;CL:0000133!1.23e-07!59;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002494;3.35e-09;16 | |ontology_enrichment_celltype_v019=CL:0002494;3.35e-09;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.05e-09,121;CL:0002494,5.49e-09,16;CL:0002321,8.29e-09,250;CL:0000393,6.94e-08,61;CL:0000211,6.94e-08,61;CL:0000192,4.36e-07,43;CL:0000514,4.36e-07,43;CL:0000187,7.44e-07,55;CL:0000148,8.94e-07,10;CL:0000541,8.94e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.06e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;5.06e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.08e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.94e-12!79;UBERON:0007798!2.94e-12!79;UBERON:0004872!1.38e-11!84;UBERON:0004535!1.05e-09!110;UBERON:0001009!2.12e-09!113;UBERON:0000477!2.40e-09!286;UBERON:0000468!3.27e-09!659;UBERON:0000055!8.32e-09!69;UBERON:0001981!1.04e-08!60;UBERON:0007500!1.04e-08!60;UBERON:0004537!1.04e-08!60;UBERON:0006965!1.04e-08!60;UBERON:0003914!3.33e-08!118;UBERON:0000922!5.42e-08!612;UBERON:0004111!1.04e-07!241;UBERON:0000119!1.57e-07!312;UBERON:0000483!2.67e-07!309;UBERON:0000948!4.94e-07!24;UBERON:0005498!4.94e-07!24;UBERON:0004140!4.94e-07!24;UBERON:0009881!4.94e-07!24;UBERON:0004141!4.94e-07!24;UBERON:0003084!4.94e-07!24;UBERON:0007005!4.94e-07!24;UBERON:0004139!4.94e-07!24;UBERON:0004291!4.94e-07!24;UBERON:0000467!8.69e-07!625;UBERON:0000480!9.81e-07!626 | |ontology_enrichment_uberon=UBERON:0002049!2.94e-12!79;UBERON:0007798!2.94e-12!79;UBERON:0004872!1.38e-11!84;UBERON:0004535!1.05e-09!110;UBERON:0001009!2.12e-09!113;UBERON:0000477!2.40e-09!286;UBERON:0000468!3.27e-09!659;UBERON:0000055!8.32e-09!69;UBERON:0001981!1.04e-08!60;UBERON:0007500!1.04e-08!60;UBERON:0004537!1.04e-08!60;UBERON:0006965!1.04e-08!60;UBERON:0003914!3.33e-08!118;UBERON:0000922!5.42e-08!612;UBERON:0004111!1.04e-07!241;UBERON:0000119!1.57e-07!312;UBERON:0000483!2.67e-07!309;UBERON:0000948!4.94e-07!24;UBERON:0005498!4.94e-07!24;UBERON:0004140!4.94e-07!24;UBERON:0009881!4.94e-07!24;UBERON:0004141!4.94e-07!24;UBERON:0003084!4.94e-07!24;UBERON:0007005!4.94e-07!24;UBERON:0004139!4.94e-07!24;UBERON:0004291!4.94e-07!24;UBERON:0000467!8.69e-07!625;UBERON:0000480!9.81e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;8.35e-09;22!UBERON:0006876;1.66e-07;11!UBERON:0007100;3.33e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000948;8.35e-09;22!UBERON:0006876;1.66e-07;11!UBERON:0007100;3.33e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.17e-13,109;UBERON:0001009,3.59e-12,112;UBERON:0002049,4.73e-12,78;UBERON:0007798,4.73e-12,78;UBERON:0004872,3.69e-11,83;UBERON:0000948,4.10e-10,24;UBERON:0005498,4.10e-10,24;UBERON:0004140,4.10e-10,24;UBERON:0009881,4.10e-10,24;UBERON:0004141,4.10e-10,24;UBERON:0003084,4.10e-10,24;UBERON:0007005,4.10e-10,24;UBERON:0004139,4.10e-10,24;UBERON:0004291,4.10e-10,24;UBERON:0007100,2.12e-08,27;UBERON:0006876,5.15e-08,11;UBERON:0000055,3.32e-07,68;UBERON:0007500,4.74e-07,59;UBERON:0001981,4.74e-07,59;UBERON:0004537,4.74e-07,59;UBERON:0006965,4.74e-07,59;UBERON:0002385,6.23e-07,64;UBERON:0001015,6.23e-07,64;UBERON:0000383,6.23e-07,64;UBERON:0003914,6.78e-07,117 | |||
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| ||
|short_description=p5@LHFPL2 | |short_description=p5@LHFPL2 | ||
}} | }} |
Revision as of 18:59, 19 November 2012
Short description: | p5@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LHFPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503686_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.05e-09 | 121 |
cardiocyte | 5.49e-09 | 16 |
embryonic cell | 8.29e-09 | 250 |
electrically responsive cell | 6.94e-08 | 61 |
electrically active cell | 6.94e-08 | 61 |
smooth muscle cell | 4.36e-07 | 43 |
smooth muscle myoblast | 4.36e-07 | 43 |
muscle cell | 7.44e-07 | 55 |
melanocyte | 8.94e-07 | 10 |
melanoblast | 8.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.17e-13 | 109 |
circulatory system | 3.59e-12 | 112 |
vasculature | 4.73e-12 | 78 |
vascular system | 4.73e-12 | 78 |
splanchnic layer of lateral plate mesoderm | 3.69e-11 | 83 |
heart | 4.10e-10 | 24 |
primitive heart tube | 4.10e-10 | 24 |
primary heart field | 4.10e-10 | 24 |
anterior lateral plate mesoderm | 4.10e-10 | 24 |
heart tube | 4.10e-10 | 24 |
heart primordium | 4.10e-10 | 24 |
cardiac mesoderm | 4.10e-10 | 24 |
cardiogenic plate | 4.10e-10 | 24 |
heart rudiment | 4.10e-10 | 24 |
primary circulatory organ | 2.12e-08 | 27 |
vasculature of organ | 5.15e-08 | 11 |
vessel | 3.32e-07 | 68 |
epithelial tube open at both ends | 4.74e-07 | 59 |
blood vessel | 4.74e-07 | 59 |
blood vasculature | 4.74e-07 | 59 |
vascular cord | 4.74e-07 | 59 |
muscle tissue | 6.23e-07 | 64 |
musculature | 6.23e-07 | 64 |
musculature of body | 6.23e-07 | 64 |
epithelial tube | 6.78e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.08e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.