FFCP PHASE1:Hg19::chr6:6803656..6803661,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.00e-17!254;CL:0002076!2.28e-16!43;CL:0002368!3.42e-13!13;CL:0000223!3.66e-11!59;CL:0002202!1.85e-10!9;CL:0002632!1.85e-10!9;CL:0000453!1.37e-09!5;CL:0002328!3.44e-07!3;CL:0000063!3.73e-07!578;CL:0000068!5.36e-07!3;CL:0000069!5.36e-07!3;CL:0000307!5.36e-07!3;CL:0000377!5.36e-07!3 | |ontology_enrichment_celltype=CL:0000066!4.00e-17!254;CL:0002076!2.28e-16!43;CL:0002368!3.42e-13!13;CL:0000223!3.66e-11!59;CL:0002202!1.85e-10!9;CL:0002632!1.85e-10!9;CL:0000453!1.37e-09!5;CL:0002328!3.44e-07!3;CL:0000063!3.73e-07!578;CL:0000068!5.36e-07!3;CL:0000069!5.36e-07!3;CL:0000307!5.36e-07!3;CL:0000377!5.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.59e-27;3!CL:0002202;6.00e-25;9!CL:0002632;6.00e-25;9!CL:0001014;6.71e-19;2!CL:0001016;6.71e-19;2!CL:0002368;3.01e-17;13!CL:0000307;3.96e-13;3!CL:1001319;6.61e-10;1!CL:1000600;6.61e-10;1!CL:0000453;4.22e-08;5!CL:0000312;6.76e-08;5!CL:0002188;8.91e-08;5!CL:0000082;1.14e-07;19!CL:0000840;6.94e-07;5 | |ontology_enrichment_celltype_v019=CL:0002328;1.59e-27;3!CL:0002202;6.00e-25;9!CL:0002632;6.00e-25;9!CL:0001014;6.71e-19;2!CL:0001016;6.71e-19;2!CL:0002368;3.01e-17;13!CL:0000307;3.96e-13;3!CL:1001319;6.61e-10;1!CL:1000600;6.61e-10;1!CL:0000453;4.22e-08;5!CL:0000312;6.76e-08;5!CL:0002188;8.91e-08;5!CL:0000082;1.14e-07;19!CL:0000840;6.94e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.75e-27,3;CL:0002202,6.17e-25,9;CL:0002632,6.17e-25,9;CL:0001014,6.43e-19,2;CL:0001016,6.43e-19,2;CL:0002368,3.07e-17,13;CL:0000068,3.85e-13,3;CL:0000069,3.85e-13,3;CL:0000307,3.85e-13,3;CL:0000377,3.85e-13,3;CL:1001319,6.33e-10,1;CL:1000600,6.33e-10,1;CL:0000066,2.72e-09,253;CL:0000453,4.15e-08,5;CL:0000312,8.04e-08,5;CL:0002188,9.55e-08,5;CL:0000082,1.09e-07,19;CL:0002076,3.45e-07,42;CL:0000840,6.85e-07,5;CL:0001029,6.85e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;3.96e-13;3 | |ontology_enrichment_development_v019=CL:0000377;3.96e-13;3 | ||
|ontology_enrichment_disease=DOID:305!4.74e-15!106;DOID:162!3.44e-14!235;DOID:0050687!1.52e-13!143;DOID:14566!1.54e-13!239;DOID:1749!8.33e-10!14 | |ontology_enrichment_disease=DOID:305!4.74e-15!106;DOID:162!3.44e-14!235;DOID:0050687!1.52e-13!143;DOID:14566!1.54e-13!239;DOID:1749!8.33e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:3111;6.61e-10;1!DOID:3603;6.61e-10;1 | |ontology_enrichment_disease_v019=DOID:3111;6.61e-10;1!DOID:3603;6.61e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,4.44e-10,1;DOID:3603,4.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.96e-10!53;UBERON:0001004!1.21e-09!72;UBERON:0000072!3.16e-09!46;UBERON:0005153!1.80e-07!37;UBERON:0008947!2.58e-07!38;UBERON:0003258!2.58e-07!38;UBERON:0004119!3.00e-07!169;UBERON:0000925!3.00e-07!169;UBERON:0006595!3.00e-07!169;UBERON:0004815!3.44e-07!3;UBERON:0002031!3.44e-07!3;UBERON:0000344!7.94e-07!12 | |ontology_enrichment_uberon=UBERON:0000065!1.96e-10!53;UBERON:0001004!1.21e-09!72;UBERON:0000072!3.16e-09!46;UBERON:0005153!1.80e-07!37;UBERON:0008947!2.58e-07!38;UBERON:0003258!2.58e-07!38;UBERON:0004119!3.00e-07!169;UBERON:0000925!3.00e-07!169;UBERON:0006595!3.00e-07!169;UBERON:0004815!3.44e-07!3;UBERON:0002031!3.44e-07!3;UBERON:0000344!7.94e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.59e-27;3!UBERON:0002031;1.59e-27;3!UBERON:0002185;9.02e-17;5!UBERON:0007196;6.23e-15;15!UBERON:0001558;6.23e-15;15!UBERON:0000485;3.86e-12;7!UBERON:0004645;6.61e-10;1!UBERON:0004913;6.61e-10;1!UBERON:0003703;6.61e-10;1!UBERON:0001256;6.61e-10;1!UBERON:0001259;6.61e-10;1!UBERON:0001174;6.61e-10;1!UBERON:0004914;6.61e-10;1!UBERON:0005178;1.89e-09;34!UBERON:0002224;1.89e-09;34!UBERON:0005181;5.03e-08;35!UBERON:0000072;8.53e-08;37!UBERON:0004802;1.14e-07;19!UBERON:0000115;1.14e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0004815;1.59e-27;3!UBERON:0002031;1.59e-27;3!UBERON:0002185;9.02e-17;5!UBERON:0007196;6.23e-15;15!UBERON:0001558;6.23e-15;15!UBERON:0000485;3.86e-12;7!UBERON:0004645;6.61e-10;1!UBERON:0004913;6.61e-10;1!UBERON:0003703;6.61e-10;1!UBERON:0001256;6.61e-10;1!UBERON:0001259;6.61e-10;1!UBERON:0001174;6.61e-10;1!UBERON:0004914;6.61e-10;1!UBERON:0005178;1.89e-09;34!UBERON:0002224;1.89e-09;34!UBERON:0005181;5.03e-08;35!UBERON:0000072;8.53e-08;37!UBERON:0004802;1.14e-07;19!UBERON:0000115;1.14e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.75e-27,3;UBERON:0002031,1.75e-27,3;UBERON:0002185,9.52e-17,5;UBERON:0007196,6.33e-15,15;UBERON:0001558,6.33e-15,15;UBERON:0004913,3.71e-10,1;UBERON:0003703,3.71e-10,1;UBERON:0001174,3.71e-10,1;UBERON:0004914,3.71e-10,1;UBERON:0004645,6.33e-10,1;UBERON:0001256,6.33e-10,1;UBERON:0001259,6.33e-10,1;UBERON:0000485,1.53e-09,9;UBERON:0005178,4.89e-09,34;UBERON:0002224,4.89e-09,34;UBERON:0005181,9.16e-09,35;UBERON:0000072,1.64e-08,47;UBERON:0008947,4.94e-08,38;UBERON:0003258,4.94e-08,38;UBERON:0004802,1.09e-07,19;UBERON:0000115,1.09e-07,19;UBERON:0000065,2.62e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,9.19421224478927,6.92773613189975,2.21852406100073,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,1.1240175325762,2.71428225511403,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,1.74380363108377,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,9.38423185750102,11.9780083347455,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0.236387681767936,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.359030577639089,0,0,0,0,1.02193298195737,0,0,0,0,0,1.13852239634511,0.158936578980379,0,0.489698424477443,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0.569219092059585,0,0,0,1.39294730528644,0,0,0.290268993867255,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0.576219191952599,0,1.17847017308398,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,4.27450393947851,3.86900977278975,0,0.335434687599266,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.779441235357554,0.265729680626726,0.163565394255844,0,0,1.69049698686902,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0.314531883711793,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0.917142992608395,1.15525666150338,0,0,0,0,0,0,0,0,1.92212912082159,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,1.38385556638657,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p@chr6:6803656..6803661,+ | |short_description=p@chr6:6803656..6803661,+ | ||
}} | }} |
Revision as of 15:11, 19 November 2012
Short description: | p@chr6:6803656..6803661, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:6803656..6803661, + |
Coexpression cluster: | C1399_Bronchial_Tracheal_bronchial_Lymphatic_salivary_Small_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.75e-27 | 3 |
epithelial cell of tracheobronchial tree | 6.17e-25 | 9 |
epithelial cell of lower respiratory tract | 6.17e-25 | 9 |
CD1a-positive Langerhans cell | 6.43e-19 | 2 |
immature CD1a-positive Langerhans cell | 6.43e-19 | 2 |
respiratory epithelial cell | 3.07e-17 | 13 |
duct epithelial cell | 3.85e-13 | 3 |
branched duct epithelial cell | 3.85e-13 | 3 |
tracheal epithelial cell | 3.85e-13 | 3 |
tracheoblast | 3.85e-13 | 3 |
bladder cell | 6.33e-10 | 1 |
lower urinary tract cell | 6.33e-10 | 1 |
epithelial cell | 2.72e-09 | 253 |
Langerhans cell | 4.15e-08 | 5 |
keratinocyte | 8.04e-08 | 5 |
glomerular endothelial cell | 9.55e-08 | 5 |
epithelial cell of lung | 1.09e-07 | 19 |
endo-epithelial cell | 3.45e-07 | 42 |
immature conventional dendritic cell | 6.85e-07 | 5 |
common dendritic progenitor | 6.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.75e-27 | 3 |
epithelium of bronchus | 1.75e-27 | 3 |
bronchus | 9.52e-17 | 5 |
tracheobronchial tree | 6.33e-15 | 15 |
lower respiratory tract | 6.33e-15 | 15 |
hepatopancreatic ampulla | 3.71e-10 | 1 |
extrahepatic bile duct | 3.71e-10 | 1 |
common bile duct | 3.71e-10 | 1 |
duodenal papilla | 3.71e-10 | 1 |
urinary bladder urothelium | 6.33e-10 | 1 |
wall of urinary bladder | 6.33e-10 | 1 |
mucosa of urinary bladder | 6.33e-10 | 1 |
simple columnar epithelium | 1.53e-09 | 9 |
thoracic cavity element | 4.89e-09 | 34 |
thoracic cavity | 4.89e-09 | 34 |
thoracic segment organ | 9.16e-09 | 35 |
segment of respiratory tract | 1.64e-08 | 47 |
respiratory primordium | 4.94e-08 | 38 |
endoderm of foregut | 4.94e-08 | 38 |
respiratory tract epithelium | 1.09e-07 | 19 |
lung epithelium | 1.09e-07 | 19 |
respiratory tract | 2.62e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.44e-10 | 1 |
mucinous cystadenocarcinoma | 4.44e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.