FFCP PHASE1:Hg19::chr15:59908698..59908705,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000167!6.59e-08!1;CL:0000164!6.59e-08!1;CL:0000502!6.59e-08!1;CL:0000172!6.59e-08!1;CL:0000173!6.59e-08!1;CL:0002351!6.59e-08!1;CL:0000083!4.10e-07!4 | |ontology_enrichment_celltype=CL:0000167!6.59e-08!1;CL:0000164!6.59e-08!1;CL:0000502!6.59e-08!1;CL:0000172!6.59e-08!1;CL:0000173!6.59e-08!1;CL:0002351!6.59e-08!1;CL:0000083!4.10e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.62e-41;1!CL:0000164;6.62e-41;1!CL:0000502;6.62e-41;1!CL:0000172;6.62e-41;1!CL:0000173;6.62e-41;1!CL:0002231;1.71e-14;3 | |ontology_enrichment_celltype_v019=CL:0000167;6.62e-41;1!CL:0000164;6.62e-41;1!CL:0000502;6.62e-41;1!CL:0000172;6.62e-41;1!CL:0000173;6.62e-41;1!CL:0002231;1.71e-14;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.62e-41,1;CL:0000164,6.62e-41,1;CL:0000502,6.62e-41,1;CL:0000172,6.62e-41,1;CL:0000173,6.62e-41,1;CL:0002351,6.62e-41,1;CL:0002231,1.83e-14,3 | |||
|ontology_enrichment_development_v019=CL:0002351;6.62e-41;1 | |ontology_enrichment_development_v019=CL:0002351;6.62e-41;1 | ||
|ontology_enrichment_disease=DOID:4929!4.60e-13!2;DOID:4430!6.59e-08!1;DOID:1793!4.10e-07!4 | |ontology_enrichment_disease=DOID:4929!4.60e-13!2;DOID:4430!6.59e-08!1;DOID:1793!4.10e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:4430;6.62e-41;1!DOID:169;5.54e-08;6 | |ontology_enrichment_disease_v019=DOID:4430;6.62e-41;1!DOID:169;5.54e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,6.62e-41,1;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!7.10e-14!2;UBERON:0000160!7.63e-10!27;UBERON:0004119!5.82e-09!169;UBERON:0000925!5.82e-09!169;UBERON:0006595!5.82e-09!169;UBERON:0004921!9.80e-09!129;UBERON:0004185!9.80e-09!129;UBERON:0001154!1.42e-07!1;UBERON:0001153!1.42e-07!1;UBERON:0005409!1.83e-07!35;UBERON:0004913!2.66e-07!1;UBERON:0003703!2.66e-07!1;UBERON:0001174!2.66e-07!1;UBERON:0004914!2.66e-07!1;UBERON:0002372!2.83e-07!1;UBERON:0001961!2.83e-07!1;UBERON:0001744!2.83e-07!1;UBERON:0001735!2.83e-07!1;UBERON:0002394!6.07e-07!4;UBERON:0003928!6.07e-07!4;UBERON:0001007!9.37e-07!155;UBERON:0001555!9.37e-07!155;UBERON:0007026!9.37e-07!155 | |ontology_enrichment_uberon=UBERON:0003127!7.10e-14!2;UBERON:0000160!7.63e-10!27;UBERON:0004119!5.82e-09!169;UBERON:0000925!5.82e-09!169;UBERON:0006595!5.82e-09!169;UBERON:0004921!9.80e-09!129;UBERON:0004185!9.80e-09!129;UBERON:0001154!1.42e-07!1;UBERON:0001153!1.42e-07!1;UBERON:0005409!1.83e-07!35;UBERON:0004913!2.66e-07!1;UBERON:0003703!2.66e-07!1;UBERON:0001174!2.66e-07!1;UBERON:0004914!2.66e-07!1;UBERON:0002372!2.83e-07!1;UBERON:0001961!2.83e-07!1;UBERON:0001744!2.83e-07!1;UBERON:0001735!2.83e-07!1;UBERON:0002394!6.07e-07!4;UBERON:0003928!6.07e-07!4;UBERON:0001007!9.37e-07!155;UBERON:0001555!9.37e-07!155;UBERON:0007026!9.37e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.96e-21;2!UBERON:0003126;6.39e-07;7!UBERON:0001005;6.39e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0003127;6.96e-21;2!UBERON:0003126;6.39e-07;7!UBERON:0001005;6.39e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.96e-21,2;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02578175658972,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,4.70317296361523,0,8.72003224276016,0,0,0,0,0,0,0,2.14264726326789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,1.00411087549747,0.665320713092027,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02578175658972,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,4.70317296361523,0,8.72003224276016,0,0,0,0,0,0,0,2.14264726326789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,1.00411087549747,0.665320713092027,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p22@GCNT3 | |short_description=p22@GCNT3 | ||
}} | }} |
Revision as of 13:53, 19 November 2012
Short description: | p22@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | -24bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.62e-41 | 1 |
enteroendocrine cell | 6.62e-41 | 1 |
type D enteroendocrine cell | 6.62e-41 | 1 |
somatostatin secreting cell | 6.62e-41 | 1 |
pancreatic D cell | 6.62e-41 | 1 |
progenitor cell of endocrine pancreas | 6.62e-41 | 1 |
epithelial cell of prostate | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.96e-21 | 2 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.62e-41 | 1 |
neuroendocrine tumor | 5.54e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.