FFCP PHASE1:Hg19::chr13:32890201..32890222,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002009!9.97e-36!65;CL:0000557!3.67e-35!71;CL:0002194!3.94e-33!63;CL:0000576!3.94e-33!63;CL:0000040!3.94e-33!63;CL:0000559!3.94e-33!63;CL:0000839!4.13e-30!70;CL:0000763!6.15e-30!112;CL:0000049!6.15e-30!112;CL:0000766!6.35e-30!76;CL:0002057!1.59e-25!42;CL:0000860!1.06e-24!45;CL:0000037!7.69e-21!172;CL:0000566!7.69e-21!172;CL:0000988!2.00e-20!182;CL:0000738!8.66e-20!140;CL:0002032!8.60e-19!165;CL:0000837!8.60e-19!165;CL:0002031!2.56e-17!124;CL:0002087!2.99e-17!119;CL:0000451!1.38e-10!10;CL:0000990!1.46e-10!8;CL:0000840!2.40e-10!5;CL:0001029!2.40e-10!5;CL:0000134!2.57e-09!358;CL:0002320!3.83e-09!365;CL:0000048!1.36e-07!430;CL:0000034!1.49e-07!444;CL:0000219!1.80e-07!390;CL:0000723!3.48e-07!436 | |ontology_enrichment_celltype=CL:0002009!9.97e-36!65;CL:0000557!3.67e-35!71;CL:0002194!3.94e-33!63;CL:0000576!3.94e-33!63;CL:0000040!3.94e-33!63;CL:0000559!3.94e-33!63;CL:0000839!4.13e-30!70;CL:0000763!6.15e-30!112;CL:0000049!6.15e-30!112;CL:0000766!6.35e-30!76;CL:0002057!1.59e-25!42;CL:0000860!1.06e-24!45;CL:0000037!7.69e-21!172;CL:0000566!7.69e-21!172;CL:0000988!2.00e-20!182;CL:0000738!8.66e-20!140;CL:0002032!8.60e-19!165;CL:0000837!8.60e-19!165;CL:0002031!2.56e-17!124;CL:0002087!2.99e-17!119;CL:0000451!1.38e-10!10;CL:0000990!1.46e-10!8;CL:0000840!2.40e-10!5;CL:0001029!2.40e-10!5;CL:0000134!2.57e-09!358;CL:0002320!3.83e-09!365;CL:0000048!1.36e-07!430;CL:0000034!1.49e-07!444;CL:0000219!1.80e-07!390;CL:0000723!3.48e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.42e-46;33!CL:0002057;7.42e-46;33!CL:0000473;1.94e-34;39!CL:0000234;1.94e-34;39!CL:0000576;3.24e-28;48!CL:0000840;2.54e-16;5!CL:0000763;1.03e-13;100!CL:0000766;3.60e-13;69!CL:0001014;5.36e-13;2!CL:0001016;5.36e-13;2!CL:0000990;6.15e-11;8!CL:0000451;5.69e-09;10!CL:0002087;6.69e-08;104!CL:0000738;9.32e-08;136!CL:0000037;2.50e-07;1!CL:0001024;2.50e-07;1!CL:0002032;3.84e-07;1!CL:0000557;3.84e-07;1 | |ontology_enrichment_celltype_v019=CL:0000860;7.42e-46;33!CL:0002057;7.42e-46;33!CL:0000473;1.94e-34;39!CL:0000234;1.94e-34;39!CL:0000576;3.24e-28;48!CL:0000840;2.54e-16;5!CL:0000763;1.03e-13;100!CL:0000766;3.60e-13;69!CL:0001014;5.36e-13;2!CL:0001016;5.36e-13;2!CL:0000990;6.15e-11;8!CL:0000451;5.69e-09;10!CL:0002087;6.69e-08;104!CL:0000738;9.32e-08;136!CL:0000037;2.50e-07;1!CL:0001024;2.50e-07;1!CL:0002032;3.84e-07;1!CL:0000557;3.84e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.95e-52,61;CL:0000557,1.39e-51,67;CL:0002194,2.64e-45,59;CL:0000576,2.64e-45,59;CL:0000040,2.64e-45,59;CL:0000559,2.64e-45,59;CL:0000860,2.41e-44,42;CL:0002057,2.41e-44,42;CL:0000473,9.37e-43,48;CL:0000234,9.37e-43,48;CL:0000763,6.09e-42,108;CL:0000049,6.09e-42,108;CL:0000839,4.21e-40,66;CL:0000766,4.55e-40,72;CL:0000037,3.21e-27,168;CL:0002032,1.80e-26,161;CL:0000837,1.80e-26,161;CL:0000988,1.44e-25,177;CL:0002031,1.59e-24,120;CL:0000738,3.68e-23,136;CL:0002087,2.99e-21,115;CL:0000840,2.49e-16,5;CL:0001029,2.49e-16,5;CL:0001014,4.60e-13,2;CL:0001016,4.60e-13,2;CL:0000990,6.07e-11,8;CL:0000134,5.06e-10,354;CL:0002320,1.02e-09,361;CL:0000451,5.63e-09,10;CL:0000219,1.21e-08,386;CL:0000034,1.56e-08,441;CL:0001024,2.21e-07,1;CL:0000048,2.51e-07,427;CL:0000723,3.82e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-30;42!CL:0000049;9.55e-12;108 | |ontology_enrichment_development_v019=CL:0002057;2.73e-30;42!CL:0000049;9.55e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.76e-33!80;UBERON:0002390!8.94e-30!102;UBERON:0003061!8.94e-30!102;UBERON:0001474!1.47e-29!86;UBERON:0002193!1.41e-25!112;UBERON:0002405!3.96e-23!115;UBERON:0004765!7.33e-23!101;UBERON:0001434!7.33e-23!101;UBERON:0002204!5.70e-14!167;UBERON:0003081!3.69e-11!216;UBERON:0002384!8.56e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!5.76e-33!80;UBERON:0002390!8.94e-30!102;UBERON:0003061!8.94e-30!102;UBERON:0001474!1.47e-29!86;UBERON:0002193!1.41e-25!112;UBERON:0002405!3.96e-23!115;UBERON:0004765!7.33e-23!101;UBERON:0001434!7.33e-23!101;UBERON:0002204!5.70e-14!167;UBERON:0003081!3.69e-11!216;UBERON:0002384!8.56e-09!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.72e-49,76;UBERON:0001474,5.30e-45,82;UBERON:0004765,1.32e-40,90;UBERON:0002405,3.79e-39,93;UBERON:0002390,6.46e-37,98;UBERON:0003061,6.46e-37,98;UBERON:0001434,4.38e-36,100;UBERON:0002193,4.58e-33,108;UBERON:0002204,1.17e-19,167;UBERON:0003081,2.81e-15,203;UBERON:0002384,2.66e-09,371;UBERON:0000926,5.09e-08,315;UBERON:0004120,5.09e-08,315;UBERON:0006603,5.09e-08,315 | |||
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| ||
|short_description=p5@BRCA2 | |short_description=p5@BRCA2 | ||
}} | }} |
Revision as of 12:29, 19 November 2012
Short description: | p5@BRCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BRCA2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -375bp_to_DQ897648, GU014835_5end |
EntrezGene: | BRCA2 |
HGNC: | 1101 |
UniProt: | A1YBP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.72e-49 | 76 |
bone element | 5.30e-45 | 82 |
skeletal element | 1.32e-40 | 90 |
immune system | 3.79e-39 | 93 |
hematopoietic system | 6.46e-37 | 98 |
blood island | 6.46e-37 | 98 |
skeletal system | 4.38e-36 | 100 |
hemolymphoid system | 4.58e-33 | 108 |
musculoskeletal system | 1.17e-19 | 167 |
lateral plate mesoderm | 2.81e-15 | 203 |
connective tissue | 2.66e-09 | 371 |
mesoderm | 5.09e-08 | 315 |
mesoderm-derived structure | 5.09e-08 | 315 |
presumptive mesoderm | 5.09e-08 | 315 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.