FFCP PHASE1:Hg19::chr19:36245740..36245750,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.29e-20!180;CL:0000680!7.14e-20!57;CL:0000056!7.14e-20!57;CL:0000355!7.14e-20!57;CL:0000187!1.38e-19!54;CL:0000183!1.40e-17!59;CL:0000393!2.91e-17!60;CL:0000211!2.91e-17!60;CL:0000192!1.63e-16!42;CL:0000514!1.63e-16!42;CL:0000359!5.31e-10!32;CL:0000057!7.21e-10!75;CL:0002334!2.54e-08!12 | |ontology_enrichment_celltype=CL:0000055!2.29e-20!180;CL:0000680!7.14e-20!57;CL:0000056!7.14e-20!57;CL:0000355!7.14e-20!57;CL:0000187!1.38e-19!54;CL:0000183!1.40e-17!59;CL:0000393!2.91e-17!60;CL:0000211!2.91e-17!60;CL:0000192!1.63e-16!42;CL:0000514!1.63e-16!42;CL:0000359!5.31e-10!32;CL:0000057!7.21e-10!75;CL:0002334!2.54e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002615;8.01e-10;3!CL:0000136;9.84e-08;13!CL:0002195;2.47e-07;2!CL:0002571;2.47e-07;2!CL:0000192;4.84e-07;43 | |ontology_enrichment_celltype_v019=CL:0002615;8.01e-10;3!CL:0000136;9.84e-08;13!CL:0002195;2.47e-07;2!CL:0002571;2.47e-07;2!CL:0000192;4.84e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,9.47e-10,3;CL:0000192,8.47e-09,43;CL:0000514,8.47e-09,43;CL:0000136,1.42e-08,15;CL:0002195,2.45e-07,2;CL:0002571,2.45e-07,2;CL:0000187,2.64e-07,55;CL:0002561,6.82e-07,2;CL:0000680,9.22e-07,58;CL:0000056,9.22e-07,58;CL:0000355,9.22e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.84e-07;43 | |ontology_enrichment_development_v019=CL:0000514;4.84e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.24e-09;3!DOID:127;2.24e-09;3!DOID:0060072;4.10e-07;4!DOID:114;5.08e-07;2 | |ontology_enrichment_disease_v019=DOID:0060084;2.24e-09;3!DOID:127;2.24e-09;3!DOID:0060072;4.10e-07;4!DOID:114;5.08e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.73e-09,3;DOID:127,1.73e-09,3;DOID:0060072,3.38e-07,4;DOID:114,5.91e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.02e-24!63;UBERON:0001015!1.02e-24!63;UBERON:0000383!1.02e-24!63;UBERON:0001134!3.05e-23!61;UBERON:0002036!3.05e-23!61;UBERON:0003082!3.05e-23!61;UBERON:0004290!4.57e-20!70;UBERON:0000914!7.62e-17!83;UBERON:0002329!7.62e-17!83;UBERON:0003077!7.62e-17!83;UBERON:0003059!7.62e-17!83;UBERON:0007282!7.62e-17!83;UBERON:0009618!7.62e-17!83;UBERON:0007285!7.62e-17!83;UBERON:0000486!1.18e-16!82;UBERON:0000475!5.68e-11!365;UBERON:0007100!1.88e-10!27;UBERON:0005256!2.04e-10!143;UBERON:0002100!3.79e-09!216;UBERON:0000479!4.00e-09!787;UBERON:0001135!9.48e-09!15;UBERON:0000490!1.02e-08!138;UBERON:0004872!2.02e-08!84;UBERON:0000948!3.23e-08!24;UBERON:0005498!3.23e-08!24;UBERON:0004140!3.23e-08!24;UBERON:0009881!3.23e-08!24;UBERON:0004141!3.23e-08!24;UBERON:0003084!3.23e-08!24;UBERON:0007005!3.23e-08!24;UBERON:0004139!3.23e-08!24;UBERON:0004291!3.23e-08!24;UBERON:0000468!1.45e-07!659;UBERON:0001637!1.72e-07!42;UBERON:0003509!1.72e-07!42;UBERON:0004572!1.72e-07!42;UBERON:0000481!2.02e-07!347;UBERON:0003688!2.70e-07!6;UBERON:0002358!2.70e-07!6;UBERON:0003684!2.70e-07!6;UBERON:0001178!2.70e-07!6;UBERON:0007023!4.55e-07!115;UBERON:0000483!6.02e-07!309;UBERON:0000119!6.29e-07!312;UBERON:0004573!9.71e-07!33;UBERON:0004571!9.71e-07!33 | |ontology_enrichment_uberon=UBERON:0002385!1.02e-24!63;UBERON:0001015!1.02e-24!63;UBERON:0000383!1.02e-24!63;UBERON:0001134!3.05e-23!61;UBERON:0002036!3.05e-23!61;UBERON:0003082!3.05e-23!61;UBERON:0004290!4.57e-20!70;UBERON:0000914!7.62e-17!83;UBERON:0002329!7.62e-17!83;UBERON:0003077!7.62e-17!83;UBERON:0003059!7.62e-17!83;UBERON:0007282!7.62e-17!83;UBERON:0009618!7.62e-17!83;UBERON:0007285!7.62e-17!83;UBERON:0000486!1.18e-16!82;UBERON:0000475!5.68e-11!365;UBERON:0007100!1.88e-10!27;UBERON:0005256!2.04e-10!143;UBERON:0002100!3.79e-09!216;UBERON:0000479!4.00e-09!787;UBERON:0001135!9.48e-09!15;UBERON:0000490!1.02e-08!138;UBERON:0004872!2.02e-08!84;UBERON:0000948!3.23e-08!24;UBERON:0005498!3.23e-08!24;UBERON:0004140!3.23e-08!24;UBERON:0009881!3.23e-08!24;UBERON:0004141!3.23e-08!24;UBERON:0003084!3.23e-08!24;UBERON:0007005!3.23e-08!24;UBERON:0004139!3.23e-08!24;UBERON:0004291!3.23e-08!24;UBERON:0000468!1.45e-07!659;UBERON:0001637!1.72e-07!42;UBERON:0003509!1.72e-07!42;UBERON:0004572!1.72e-07!42;UBERON:0000481!2.02e-07!347;UBERON:0003688!2.70e-07!6;UBERON:0002358!2.70e-07!6;UBERON:0003684!2.70e-07!6;UBERON:0001178!2.70e-07!6;UBERON:0007023!4.55e-07!115;UBERON:0000483!6.02e-07!309;UBERON:0000119!6.29e-07!312;UBERON:0004573!9.71e-07!33;UBERON:0004571!9.71e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.34e-12;6!UBERON:0002358;1.34e-12;6!UBERON:0003684;1.34e-12;6!UBERON:0001178;1.34e-12;6!UBERON:0004457;2.45e-11;9!UBERON:0000042;2.45e-11;9!UBERON:0001013;5.42e-09;14 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.34e-12;6!UBERON:0002358;1.34e-12;6!UBERON:0003684;1.34e-12;6!UBERON:0001178;1.34e-12;6!UBERON:0004457;2.45e-11;9!UBERON:0000042;2.45e-11;9!UBERON:0001013;5.42e-09;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.48e-12,6;UBERON:0002358,1.48e-12,6;UBERON:0003684,1.48e-12,6;UBERON:0001178,1.48e-12,6;UBERON:0002385,1.07e-11,64;UBERON:0001015,1.07e-11,64;UBERON:0000383,1.07e-11,64;UBERON:0001134,8.74e-11,62;UBERON:0002036,8.74e-11,62;UBERON:0003082,8.74e-11,62;UBERON:0002329,7.60e-09,71;UBERON:0003059,7.60e-09,71;UBERON:0007282,7.60e-09,71;UBERON:0004290,7.60e-09,71;UBERON:0009618,7.60e-09,71;UBERON:0001013,7.81e-09,14;UBERON:0003077,1.16e-08,72;UBERON:0007285,1.16e-08,72;UBERON:0007524,1.75e-08,73;UBERON:0004457,2.47e-08,12;UBERON:0000042,2.47e-08,12;UBERON:0000926,4.01e-08,315;UBERON:0004120,4.01e-08,315;UBERON:0006603,4.01e-08,315;UBERON:0000486,7.11e-08,83;UBERON:0007503,1.16e-07,78;UBERON:0003104,1.32e-07,160;UBERON:0009142,1.32e-07,160;UBERON:0005256,1.49e-07,122;UBERON:0005933,6.82e-07,2;UBERON:0005942,6.82e-07,2;UBERON:0005932,6.82e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,6.62485699251064,2.00146596706261,4.91657203870017,3.48935409640147,2.53299878168311,0,3.3954131665979,0.245733936501509,0,0,0,0.74259811776028,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.13967460498122,0.926864265692532,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0,0,0.561803226808994,0.204154171254893,0.122834317311768,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,1.06778694409284,0.635795703478686,0,0.103052529238439,0,0.744467425326359,0.168776332241266,0.389748020644795,0,0.552299391853796,0.646584227275248,0.710019185033229,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,5.77503585335668,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,7.15312891703765,0,1.86156681609409,1.04007436911366,0.257207374262142,0,0.266422179016099,8.00676764485626,10.8524321078289,0.823240336780769,0,5.68627117988073,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.59498939234882,1.00034104211935,0.813795071099207,0,0,0,0,0,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,1.24053903909388,0.460385919864187,0.561320188866147,6.02254001501795,0.511707249066704,2.41280881715411,0,0.771048469013278,0.532685175939381,0.492762936082855,1.55776328755086,0.813472649219715,0,0,0,0.68888668898764,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0,0,0,0,1.83674364755032,0.308097234229289,0.460511024178389,0.137836572484531,0.537101224341368,0.870100163485371,0,0.356128142586949,0,0,0,0,2.32422774648643,0.31481234683064,2.0911118104818,0.616067160352178,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0.632758849437452,0.190630193923825,3.58256907835867,0.855877976067841,1.27281299170375,0,0.719489830333259,1.92175920815238,0.471249609382746,1.01091240786658,1.58510321173008,0,0.48763373908959,0.487426979262569,0,1.09199929126389,1.1312434556297,2.26016233240486,0,1.32687795048244,0.438450885253763,1.73632660280006,0.655894752046633,0.405820753925408,0.6196469961995,0.563391205064483,1.29070216983646,1.27723753317057,0,0.354761064070598,1.68886108238131,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0.123563938946503,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.60412296808179,0,2.1964690054889,5.15071257763885,0.669514372325618,0.604651252380536,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,1.32418394073086,0,5.42999601753713,1.72844298240254,3.26587360109409,0,0,0.851940108927109,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,1.19403842309499,0.934853239388898,0.554805861502613,0.757612021100357,0,1.77962244319307,1.37304041038154,1.66354016139563,0.310874401165561,0.147855149989634,0,0,0,2.07353103920428,0.265841714557995,0,0.450772826991655,0,0,0.181848659202559,0,0.464033759878494,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47284760201473,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.48105589194647,0,0,0,0.336283722218824,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0.627944742804112,0,0,0,0,0,0.714765441766563,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.942286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| ||
|short_description=p@chr19:36245740..36245750,+ | |short_description=p@chr19:36245740..36245750,+ | ||
}} | }} |
Revision as of 11:40, 19 November 2012
Short description: | p@chr19:36245740..36245750, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:36245740..36245750, + |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 9.47e-10 | 3 |
smooth muscle cell | 8.47e-09 | 43 |
smooth muscle myoblast | 8.47e-09 | 43 |
fat cell | 1.42e-08 | 15 |
hepatic stem cell | 2.45e-07 | 2 |
hepatic mesenchymal stem cell | 2.45e-07 | 2 |
muscle cell | 2.64e-07 | 55 |
outer root sheath cell | 6.82e-07 | 2 |
muscle precursor cell | 9.22e-07 | 58 |
myoblast | 9.22e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.48e-12 | 6 |
peritoneum | 1.48e-12 | 6 |
abdominal cavity | 1.48e-12 | 6 |
visceral peritoneum | 1.48e-12 | 6 |
muscle tissue | 1.07e-11 | 64 |
musculature | 1.07e-11 | 64 |
musculature of body | 1.07e-11 | 64 |
skeletal muscle tissue | 8.74e-11 | 62 |
striated muscle tissue | 8.74e-11 | 62 |
myotome | 8.74e-11 | 62 |
somite | 7.60e-09 | 71 |
presomitic mesoderm | 7.60e-09 | 71 |
presumptive segmental plate | 7.60e-09 | 71 |
dermomyotome | 7.60e-09 | 71 |
trunk paraxial mesoderm | 7.60e-09 | 71 |
adipose tissue | 7.81e-09 | 14 |
paraxial mesoderm | 1.16e-08 | 72 |
presumptive paraxial mesoderm | 1.16e-08 | 72 |
dense mesenchyme tissue | 1.75e-08 | 73 |
cavity lining | 2.47e-08 | 12 |
serous membrane | 2.47e-08 | 12 |
mesoderm | 4.01e-08 | 315 |
mesoderm-derived structure | 4.01e-08 | 315 |
presumptive mesoderm | 4.01e-08 | 315 |
multilaminar epithelium | 7.11e-08 | 83 |
epithelial vesicle | 1.16e-07 | 78 |
mesenchyme | 1.32e-07 | 160 |
entire embryonic mesenchyme | 1.32e-07 | 160 |
trunk mesenchyme | 1.49e-07 | 122 |
hair root sheath | 6.82e-07 | 2 |
hair outer root sheath | 6.82e-07 | 2 |
bulb of hair follicle | 6.82e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.73e-09 | 3 |
leiomyoma | 1.73e-09 | 3 |
benign neoplasm | 3.38e-07 | 4 |
heart disease | 5.91e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.