FFCP PHASE1:Hg19::chr1:169555677..169555678,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!1.53e-25!42;CL:0000860!3.28e-23!45;CL:0000766!9.68e-17!76;CL:0000738!2.31e-16!140;CL:0002009!3.10e-14!65;CL:0002087!3.52e-14!119;CL:0002194!1.16e-13!63;CL:0000576!1.16e-13!63;CL:0000040!1.16e-13!63;CL:0000559!1.16e-13!63;CL:0000557!2.51e-13!71;CL:0000839!1.82e-12!70;CL:0002031!2.83e-12!124;CL:0000037!9.93e-11!172;CL:0000566!9.93e-11!172;CL:0000988!1.30e-10!182;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000763!4.84e-09!112;CL:0000049!4.84e-09!112;CL:0000181!5.39e-09!12;CL:0000417!5.39e-09!12;CL:0000668!5.39e-09!12;CL:0000414!5.39e-09!12;CL:0000412!5.39e-09!12;CL:0000182!5.39e-09!12;CL:0000775!8.36e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.53e-25!42;CL:0000860!3.28e-23!45;CL:0000766!9.68e-17!76;CL:0000738!2.31e-16!140;CL:0002009!3.10e-14!65;CL:0002087!3.52e-14!119;CL:0002194!1.16e-13!63;CL:0000576!1.16e-13!63;CL:0000040!1.16e-13!63;CL:0000559!1.16e-13!63;CL:0000557!2.51e-13!71;CL:0000839!1.82e-12!70;CL:0002031!2.83e-12!124;CL:0000037!9.93e-11!172;CL:0000566!9.93e-11!172;CL:0000988!1.30e-10!182;CL:0002032!1.05e-09!165;CL:0000837!1.05e-09!165;CL:0000763!4.84e-09!112;CL:0000049!4.84e-09!112;CL:0000181!5.39e-09!12;CL:0000417!5.39e-09!12;CL:0000668!5.39e-09!12;CL:0000414!5.39e-09!12;CL:0000412!5.39e-09!12;CL:0000182!5.39e-09!12;CL:0000775!8.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.91e-26;3!CL:0000094;4.18e-17;8!CL:0000081;1.69e-12;11!CL:0000182;1.50e-11;12 | |ontology_enrichment_celltype_v019=CL:0000775;3.91e-26;3!CL:0000094;4.18e-17;8!CL:0000081;1.69e-12;11!CL:0000182;1.50e-11;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.74e-26,3;CL:0000094,3.07e-17,8;CL:0000081,1.35e-12,11;CL:0000182,1.68e-11,12;CL:0000766,6.07e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.22e-19;11!UBERON:0009497;5.95e-16;13!UBERON:0006242;1.48e-09;1 | |ontology_enrichment_development_v019=UBERON:0004161;7.22e-19;11!UBERON:0009497;5.95e-16;13!UBERON:0006242;1.48e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.48e-09;1!DOID:0060061;1.48e-09;1!DOID:8691;1.48e-09;1 | |ontology_enrichment_disease_v019=DOID:0060060;1.48e-09;1!DOID:0060061;1.48e-09;1!DOID:8691;1.48e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.06e-09,1;DOID:0060061,1.06e-09,1;DOID:8691,1.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.18e-16!115;UBERON:0002390!4.15e-16!102;UBERON:0003061!4.15e-16!102;UBERON:0002193!2.03e-14!112;UBERON:0002371!7.19e-11!80;UBERON:0001474!1.54e-09!86;UBERON:0005057!5.63e-09!26;UBERON:0007023!2.33e-08!115;UBERON:0002107!4.68e-08!19;UBERON:0006925!4.68e-08!19;UBERON:0008836!4.68e-08!19;UBERON:0004765!5.66e-07!101;UBERON:0001434!5.66e-07!101;UBERON:0009497!8.52e-07!25;UBERON:0000015!8.52e-07!25;UBERON:0002423!8.52e-07!25;UBERON:0006235!8.52e-07!25;UBERON:0004161!8.52e-07!25 | |ontology_enrichment_uberon=UBERON:0002405!1.18e-16!115;UBERON:0002390!4.15e-16!102;UBERON:0003061!4.15e-16!102;UBERON:0002193!2.03e-14!112;UBERON:0002371!7.19e-11!80;UBERON:0001474!1.54e-09!86;UBERON:0005057!5.63e-09!26;UBERON:0007023!2.33e-08!115;UBERON:0002107!4.68e-08!19;UBERON:0006925!4.68e-08!19;UBERON:0008836!4.68e-08!19;UBERON:0004765!5.66e-07!101;UBERON:0001434!5.66e-07!101;UBERON:0009497!8.52e-07!25;UBERON:0000015!8.52e-07!25;UBERON:0002423!8.52e-07!25;UBERON:0006235!8.52e-07!25;UBERON:0004161!8.52e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.64e-16;25!UBERON:0002107;1.40e-15;19!UBERON:0006925;1.40e-15;19!UBERON:0002365;2.02e-09;31!UBERON:0002330;2.02e-09;31!UBERON:0002368;6.75e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0002423;9.64e-16;25!UBERON:0002107;1.40e-15;19!UBERON:0006925;1.40e-15;19!UBERON:0002365;2.02e-09;31!UBERON:0002330;2.02e-09;31!UBERON:0002368;6.75e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.21e-15,25;UBERON:0000015,1.21e-15,25;UBERON:0002423,1.21e-15,25;UBERON:0006235,1.21e-15,25;UBERON:0004161,1.21e-15,25;UBERON:0002107,1.60e-15,19;UBERON:0006925,1.60e-15,19;UBERON:0008836,1.60e-15,19;UBERON:0008835,2.40e-13,22;UBERON:0003894,2.40e-13,22;UBERON:0009854,9.57e-13,23;UBERON:0007499,1.09e-11,25;UBERON:0009856,3.20e-11,26;UBERON:0002365,2.47e-09,31;UBERON:0002330,2.47e-09,31;UBERON:0002368,3.28e-08,35;UBERON:0003929,7.85e-07,54;UBERON:0005172,7.85e-07,54;UBERON:0005173,7.85e-07,54 | |||
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| ||
|short_description=p4@F5 | |short_description=p4@F5 | ||
}} | }} |
Revision as of 11:37, 19 November 2012
Short description: | p4@F5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_F5_5end |
Coexpression cluster: | C3902_Hepatocyte_liver_hepatoma_Neutrophils_medulla_placenta_CD4 |
Association with transcript: | 40bp_to_ENST00000546081_5end |
EntrezGene: | F5 |
HGNC: | 3542 |
UniProt: | B4DU26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.74e-26 | 3 |
granulocyte | 3.07e-17 | 8 |
blood cell | 1.35e-12 | 11 |
hepatocyte | 1.68e-11 | 12 |
myeloid leukocyte | 6.07e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.21e-15 | 25 |
anatomical boundary | 1.21e-15 | 25 |
hepatobiliary system | 1.21e-15 | 25 |
foregut-midgut junction | 1.21e-15 | 25 |
septum transversum | 1.21e-15 | 25 |
liver | 1.60e-15 | 19 |
digestive gland | 1.60e-15 | 19 |
liver bud | 1.60e-15 | 19 |
hepatic diverticulum | 2.40e-13 | 22 |
liver primordium | 2.40e-13 | 22 |
digestive tract diverticulum | 9.57e-13 | 23 |
epithelial sac | 1.09e-11 | 25 |
sac | 3.20e-11 | 26 |
exocrine gland | 2.47e-09 | 31 |
exocrine system | 2.47e-09 | 31 |
endocrine gland | 3.28e-08 | 35 |
gut epithelium | 7.85e-07 | 54 |
abdomen element | 7.85e-07 | 54 |
abdominal segment element | 7.85e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.06e-09 | 1 |
cutaneous T cell lymphoma | 1.06e-09 | 1 |
mycosis fungoides | 1.06e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.