FFCP PHASE1:Hg19::chr6:155054530..155054561,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!5.81e-19!140;CL:0000037!1.04e-18!172;CL:0000566!1.04e-18!172;CL:0002032!1.46e-16!165;CL:0000837!1.46e-16!165;CL:0000988!2.43e-15!182;CL:0002057!1.07e-13!42;CL:0002031!1.54e-13!124;CL:0000766!1.45e-12!76;CL:0000763!1.47e-12!112;CL:0000049!1.47e-12!112;CL:0002087!2.96e-12!119;CL:0000860!3.00e-11!45;CL:0000557!6.59e-10!71;CL:0000839!3.93e-09!70;CL:0002009!6.09e-08!65;CL:0002194!1.24e-07!63;CL:0000576!1.24e-07!63;CL:0000040!1.24e-07!63;CL:0000559!1.24e-07!63 | |ontology_enrichment_celltype=CL:0000738!5.81e-19!140;CL:0000037!1.04e-18!172;CL:0000566!1.04e-18!172;CL:0002032!1.46e-16!165;CL:0000837!1.46e-16!165;CL:0000988!2.43e-15!182;CL:0002057!1.07e-13!42;CL:0002031!1.54e-13!124;CL:0000766!1.45e-12!76;CL:0000763!1.47e-12!112;CL:0000049!1.47e-12!112;CL:0002087!2.96e-12!119;CL:0000860!3.00e-11!45;CL:0000557!6.59e-10!71;CL:0000839!3.93e-09!70;CL:0002009!6.09e-08!65;CL:0002194!1.24e-07!63;CL:0000576!1.24e-07!63;CL:0000040!1.24e-07!63;CL:0000559!1.24e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-12;33!CL:0002057;1.28e-12;33!CL:0000576;4.69e-09;48!CL:0000766;1.01e-07;69!CL:0000473;1.36e-07;39!CL:0000234;1.36e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;1.28e-12;33!CL:0002057;1.28e-12;33!CL:0000576;4.69e-09;48!CL:0000766;1.01e-07;69!CL:0000473;1.36e-07;39!CL:0000234;1.36e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.18e-21,136;CL:0000037,1.06e-20,168;CL:0002032,1.88e-18,161;CL:0000837,1.88e-18,161;CL:0000988,1.40e-17,177;CL:0002031,1.67e-15,120;CL:0000766,4.22e-15,72;CL:0000763,1.51e-14,108;CL:0000049,1.51e-14,108;CL:0002087,3.84e-14,115;CL:0000860,1.07e-13,42;CL:0002057,1.07e-13,42;CL:0000557,3.62e-12,67;CL:0000839,2.72e-11,66;CL:0000473,2.68e-10,48;CL:0000234,2.68e-10,48;CL:0002009,5.30e-10,61;CL:0002194,1.12e-09,59;CL:0000576,1.12e-09,59;CL:0000040,1.12e-09,59;CL:0000559,1.12e-09,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-10;42 | |ontology_enrichment_development_v019=CL:0002057;2.54e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-17!115;UBERON:0002390!1.76e-08!102;UBERON:0003061!1.76e-08!102;UBERON:0001474!5.30e-08!86;UBERON:0001017!1.39e-07!82;UBERON:0005743!1.54e-07!86;UBERON:0002371!2.53e-07!80;UBERON:0002193!9.07e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!3.70e-17!115;UBERON:0002390!1.76e-08!102;UBERON:0003061!1.76e-08!102;UBERON:0001474!5.30e-08!86;UBERON:0001017!1.39e-07!82;UBERON:0005743!1.54e-07!86;UBERON:0002371!2.53e-07!80;UBERON:0002193!9.07e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.15e-17,114;UBERON:0002390,4.15e-10,98;UBERON:0003061,4.15e-10,98;UBERON:0001474,9.74e-10,82;UBERON:0002371,4.95e-09,76;UBERON:0002193,4.26e-08,108;UBERON:0004765,8.67e-08,90;UBERON:0001017,1.48e-07,81;UBERON:0002405,1.59e-07,93;UBERON:0001434,5.45e-07,100 | |||
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| ||
|short_description=p1@SCAF8 | |short_description=p1@SCAF8 | ||
}} | }} |
Revision as of 02:56, 19 November 2012
Short description: | p1@SCAF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SCAF8_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000367186_5end |
EntrezGene: | SCAF8 |
HGNC: | 20959 |
UniProt: | B7Z888 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.18e-21 | 136 |
hematopoietic stem cell | 1.06e-20 | 168 |
hematopoietic oligopotent progenitor cell | 1.88e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-18 | 161 |
hematopoietic cell | 1.40e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.67e-15 | 120 |
myeloid leukocyte | 4.22e-15 | 72 |
myeloid cell | 1.51e-14 | 108 |
common myeloid progenitor | 1.51e-14 | 108 |
nongranular leukocyte | 3.84e-14 | 115 |
classical monocyte | 1.07e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-13 | 42 |
granulocyte monocyte progenitor cell | 3.62e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.72e-11 | 66 |
defensive cell | 2.68e-10 | 48 |
phagocyte | 2.68e-10 | 48 |
macrophage dendritic cell progenitor | 5.30e-10 | 61 |
monopoietic cell | 1.12e-09 | 59 |
monocyte | 1.12e-09 | 59 |
monoblast | 1.12e-09 | 59 |
promonocyte | 1.12e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.15e-17 | 114 |
hematopoietic system | 4.15e-10 | 98 |
blood island | 4.15e-10 | 98 |
bone element | 9.74e-10 | 82 |
bone marrow | 4.95e-09 | 76 |
hemolymphoid system | 4.26e-08 | 108 |
skeletal element | 8.67e-08 | 90 |
central nervous system | 1.48e-07 | 81 |
immune system | 1.59e-07 | 93 |
skeletal system | 5.45e-07 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.