FFCP PHASE1:Hg19::chr19:4279396..4279410,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000784!1.43e-09!3 | |ontology_enrichment_celltype=CL:0000784!1.43e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.22e-40;3!CL:0000333;1.72e-24;5!CL:0000451;1.39e-11;10!CL:0002321;1.42e-08;15!CL:0000123;5.37e-08;2!CL:0000242;5.37e-08;2!CL:0002575;6.80e-08;2!CL:0000188;6.89e-07;9 | |ontology_enrichment_celltype_v019=CL:0000784;1.22e-40;3!CL:0000333;1.72e-24;5!CL:0000451;1.39e-11;10!CL:0002321;1.42e-08;15!CL:0000123;5.37e-08;2!CL:0000242;5.37e-08;2!CL:0002575;6.80e-08;2!CL:0000188;6.89e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.31e-40,3;CL:0000451,1.42e-11,10;CL:0000242,5.37e-08,2;CL:0002575,6.15e-08,2;CL:0000188,6.79e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.57e-20;6!DOID:171;1.41e-12;10!DOID:3095;6.96e-10;22!DOID:2994;6.96e-10;22 | |ontology_enrichment_disease_v019=DOID:169;1.57e-20;6!DOID:171;1.41e-12;10!DOID:3095;6.96e-10;22!DOID:2994;6.96e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,1.63e-20,6;DOID:171,1.44e-12,10;DOID:3095,6.88e-10,22;DOID:2994,6.88e-10,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;1.72e-24;5!UBERON:0002410;1.72e-24;5!UBERON:0000010;6.59e-14;8!UBERON:0001134;4.77e-08;16!UBERON:0002036;4.77e-08;16 | |ontology_enrichment_uberon_v019=UBERON:0000013;1.72e-24;5!UBERON:0002410;1.72e-24;5!UBERON:0000010;6.59e-14;8!UBERON:0001134;4.77e-08;16!UBERON:0002036;4.77e-08;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.79e-24,5;UBERON:0002410,1.79e-24,5;UBERON:0000010,6.74e-14,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,7.15471872916026,6.29194401858141,2.22874500797739,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74514739048685,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09025525240368,0,0,0.964856007391714,0,0,0.596586391912706,3.82837753280971,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0,0.694499979733169,0,0.120596438625408,0,0,0.591095237907095,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,3.74667924645505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20022211730523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68578179737669,7.00861274078432,0,2.62103131660833,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0.504143392443436,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0.913158720509496,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,8.7538341071002,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,1.90047751517155,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@SHD | |short_description=p7@SHD | ||
}} | }} |
Revision as of 23:29, 18 November 2012
Short description: | p7@SHD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SHD_5end |
Coexpression cluster: | C1241_neuroblastoma_small_Skeletal_Dendritic_Pericytes_merkel_mesenchymal |
Association with transcript: | -248bp_to_AK055673_5end |
EntrezGene: | SHD |
HGNC: | 30633 |
UniProt: | Q96IW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.31e-40 | 3 |
dendritic cell | 1.42e-11 | 10 |
Merkel cell | 5.37e-08 | 2 |
central nervous system pericyte | 6.15e-08 | 2 |
cell of skeletal muscle | 6.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.79e-24 | 5 |
autonomic nervous system | 1.79e-24 | 5 |
peripheral nervous system | 6.74e-14 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.63e-20 | 6 |
neuroectodermal tumor | 1.44e-12 | 10 |
germ cell and embryonal cancer | 6.88e-10 | 22 |
germ cell cancer | 6.88e-10 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.