FFCP PHASE1:Hg19::chr9:36400423..36400439,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.44e-31!254;CL:0000076!2.62e-11!62;CL:0000223!3.45e-09!59;CL:0000220!3.85e-09!246;CL:0002321!4.18e-09!248;CL:0002139!1.51e-07!24;CL:0000063!7.39e-07!578 | |ontology_enrichment_celltype=CL:0000066!4.44e-31!254;CL:0000076!2.62e-11!62;CL:0000223!3.45e-09!59;CL:0000220!3.85e-09!246;CL:0002321!4.18e-09!248;CL:0002139!1.51e-07!24;CL:0000063!7.39e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000154;4.49e-08;6!CL:0000150;1.35e-07;9 | |ontology_enrichment_celltype_v019=CL:0000154;4.49e-08;6!CL:0000150;1.35e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-20,253;CL:0000076,8.12e-09,63;CL:0000154,7.82e-08,6;CL:0000150,3.75e-07,9;CL:0002144,4.42e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!5.42e-19!106;DOID:0050687!3.05e-14!143;DOID:162!3.39e-12!235;DOID:14566!2.20e-11!239 | |ontology_enrichment_disease=DOID:305!5.42e-19!106;DOID:0050687!3.05e-14!143;DOID:162!3.39e-12!235;DOID:14566!2.20e-11!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.65e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;2.65e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.28e-13,106;DOID:0050687,1.93e-09,143;DOID:1749,2.69e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000487!3.54e-07!22;UBERON:0000466!6.44e-07!126 | |ontology_enrichment_uberon=UBERON:0000487!3.54e-07!22;UBERON:0000466!6.44e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.60e-07;7!UBERON:0005631;5.29e-07;10!UBERON:0000158;5.29e-07;10!UBERON:0000487;6.52e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000305;1.60e-07;7!UBERON:0005631;5.29e-07;10!UBERON:0000158;5.29e-07;10!UBERON:0000487;6.52e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,7.58e-09,8;UBERON:0009569,5.73e-08,112;UBERON:0000305,3.13e-07,7;UBERON:0000487,3.17e-07,22;UBERON:0010523,4.42e-07,3;UBERON:0001915,4.42e-07,3;UBERON:0001982,4.42e-07,3 | |||
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| ||
|short_description=p7@RNF38 | |short_description=p7@RNF38 | ||
}} | }} |
Revision as of 22:41, 18 November 2012
Short description: | p7@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RNF38_5end |
Coexpression cluster: | NA |
Association with transcript: | -127bp_to_ENST00000353739, NM_022781, NM_194329, uc003zzh.2, uc003zzi.2_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | Q9H0F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-20 | 253 |
squamous epithelial cell | 8.12e-09 | 63 |
protein secreting cell | 7.82e-08 | 6 |
glandular epithelial cell | 3.75e-07 | 9 |
capillary endothelial cell | 4.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 7.58e-09 | 8 |
subdivision of trunk | 5.73e-08 | 112 |
amnion | 3.13e-07 | 7 |
simple squamous epithelium | 3.17e-07 | 22 |
microcirculatory vessel | 4.42e-07 | 3 |
endothelium of capillary | 4.42e-07 | 3 |
capillary | 4.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.28e-13 | 106 |
cell type cancer | 1.93e-09 | 143 |
squamous cell carcinoma | 2.69e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.