FFCP PHASE1:Hg19::chr11:2188016..2188030,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002368!4.24e-09!13;CL:0002202!4.88e-08!9;CL:0002632!4.88e-08!9;CL:0000349!6.17e-08!3;CL:0002577!6.17e-08!3;CL:0002328!3.17e-07!3;CL:0000068!5.98e-07!3;CL:0000069!5.98e-07!3;CL:0000307!5.98e-07!3;CL:0000377!5.98e-07!3 | |ontology_enrichment_celltype=CL:0002368!4.24e-09!13;CL:0002202!4.88e-08!9;CL:0002632!4.88e-08!9;CL:0000349!6.17e-08!3;CL:0002577!6.17e-08!3;CL:0002328!3.17e-07!3;CL:0000068!5.98e-07!3;CL:0000069!5.98e-07!3;CL:0000307!5.98e-07!3;CL:0000377!5.98e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.99e-30;19!CL:0002577;4.02e-23;3!CL:0002536;3.82e-16;2!CL:0000650;4.94e-15;2!CL:1000500;4.94e-15;2!CL:1000618;4.94e-15;2!CL:1001318;4.94e-15;2!CL:0002173;4.94e-15;2!CL:0002537;8.41e-14;5!CL:0002599;1.10e-08;1!CL:0000669;5.82e-08;4!CL:1000507;7.32e-07;10!CL:1000494;7.32e-07;10 | |ontology_enrichment_celltype_v019=CL:0000349;2.99e-30;19!CL:0002577;4.02e-23;3!CL:0002536;3.82e-16;2!CL:0000650;4.94e-15;2!CL:1000500;4.94e-15;2!CL:1000618;4.94e-15;2!CL:1001318;4.94e-15;2!CL:0002173;4.94e-15;2!CL:0002537;8.41e-14;5!CL:0002599;1.10e-08;1!CL:0000669;5.82e-08;4!CL:1000507;7.32e-07;10!CL:1000494;7.32e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.62e-30,19;CL:0002577,3.89e-23,3;CL:0002536,3.83e-16,2;CL:0000650,5.71e-15,2;CL:1000500,5.71e-15,2;CL:1000618,5.71e-15,2;CL:1001318,5.71e-15,2;CL:0002173,5.71e-15,2;CL:0002537,7.24e-14,5;CL:0002599,1.18e-08,1;CL:0000669,6.25e-08,4;CL:1000507,7.63e-07,10;CL:1000494,7.63e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.89e-15!14;UBERON:0000158!5.89e-15!14;UBERON:0004119!6.48e-15!169;UBERON:0000925!6.48e-15!169;UBERON:0006595!6.48e-15!169;UBERON:0000466!1.33e-10!126;UBERON:0001007!3.94e-10!155;UBERON:0001555!3.94e-10!155;UBERON:0007026!3.94e-10!155;UBERON:0000464!7.75e-10!104;UBERON:0001008!1.18e-09!45;UBERON:0001987!1.19e-09!4;UBERON:0004340!1.19e-09!4;UBERON:0000077!1.47e-09!130;UBERON:0004921!4.71e-09!129;UBERON:0004185!4.71e-09!129;UBERON:0002185!6.02e-09!4;UBERON:0000064!6.95e-09!219;UBERON:0005177!8.90e-09!107;UBERON:0001046!1.13e-08!19;UBERON:0006554!1.20e-08!44;UBERON:0003064!1.47e-08!37;UBERON:0000305!2.11e-08!7;UBERON:0000062!2.74e-08!511;UBERON:0003124!3.54e-08!7;UBERON:0000162!9.67e-08!14;UBERON:0001353!9.67e-08!14;UBERON:0000163!9.67e-08!14;UBERON:0006866!9.67e-08!14;UBERON:0000164!9.67e-08!14;UBERON:0000931!9.67e-08!14;UBERON:0000478!1.17e-07!24;UBERON:0004871!2.87e-07!8;UBERON:0004815!3.17e-07!3;UBERON:0002031!3.17e-07!3;UBERON:0003886!3.82e-07!63;UBERON:0004122!3.98e-07!15;UBERON:0005156!4.28e-07!59;UBERON:0000990!4.28e-07!59;UBERON:0005911!8.17e-07!82 | |ontology_enrichment_uberon=UBERON:0005631!5.89e-15!14;UBERON:0000158!5.89e-15!14;UBERON:0004119!6.48e-15!169;UBERON:0000925!6.48e-15!169;UBERON:0006595!6.48e-15!169;UBERON:0000466!1.33e-10!126;UBERON:0001007!3.94e-10!155;UBERON:0001555!3.94e-10!155;UBERON:0007026!3.94e-10!155;UBERON:0000464!7.75e-10!104;UBERON:0001008!1.18e-09!45;UBERON:0001987!1.19e-09!4;UBERON:0004340!1.19e-09!4;UBERON:0000077!1.47e-09!130;UBERON:0004921!4.71e-09!129;UBERON:0004185!4.71e-09!129;UBERON:0002185!6.02e-09!4;UBERON:0000064!6.95e-09!219;UBERON:0005177!8.90e-09!107;UBERON:0001046!1.13e-08!19;UBERON:0006554!1.20e-08!44;UBERON:0003064!1.47e-08!37;UBERON:0000305!2.11e-08!7;UBERON:0000062!2.74e-08!511;UBERON:0003124!3.54e-08!7;UBERON:0000162!9.67e-08!14;UBERON:0001353!9.67e-08!14;UBERON:0000163!9.67e-08!14;UBERON:0006866!9.67e-08!14;UBERON:0000164!9.67e-08!14;UBERON:0000931!9.67e-08!14;UBERON:0000478!1.17e-07!24;UBERON:0004871!2.87e-07!8;UBERON:0004815!3.17e-07!3;UBERON:0002031!3.17e-07!3;UBERON:0003886!3.82e-07!63;UBERON:0004122!3.98e-07!15;UBERON:0005156!4.28e-07!59;UBERON:0000990!4.28e-07!59;UBERON:0005911!8.17e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.28e-26;7!UBERON:0005631;3.33e-26;10!UBERON:0000158;3.33e-26;10!UBERON:0000478;1.16e-23;24!UBERON:0001987;1.72e-17;4!UBERON:0003567;4.94e-15;2!UBERON:0003838;4.94e-15;2!UBERON:0003586;4.94e-15;2!UBERON:0005169;4.94e-15;2!UBERON:0002321;4.94e-15;2!UBERON:0005215;4.94e-15;2!UBERON:0002303;4.94e-15;2!UBERON:0002319;4.94e-15;2!UBERON:0004913;1.10e-08;1!UBERON:0003703;1.10e-08;1!UBERON:0001174;1.10e-08;1!UBERON:0004914;1.10e-08;1!UBERON:0000996;2.29e-08;1!UBERON:0003891;5.82e-08;4!UBERON:0004211;7.32e-07;10!UBERON:0009773;7.32e-07;10!UBERON:0001231;7.32e-07;10!UBERON:0004810;7.32e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000305;2.28e-26;7!UBERON:0005631;3.33e-26;10!UBERON:0000158;3.33e-26;10!UBERON:0000478;1.16e-23;24!UBERON:0001987;1.72e-17;4!UBERON:0003567;4.94e-15;2!UBERON:0003838;4.94e-15;2!UBERON:0003586;4.94e-15;2!UBERON:0005169;4.94e-15;2!UBERON:0002321;4.94e-15;2!UBERON:0005215;4.94e-15;2!UBERON:0002303;4.94e-15;2!UBERON:0002319;4.94e-15;2!UBERON:0004913;1.10e-08;1!UBERON:0003703;1.10e-08;1!UBERON:0001174;1.10e-08;1!UBERON:0004914;1.10e-08;1!UBERON:0000996;2.29e-08;1!UBERON:0003891;5.82e-08;4!UBERON:0004211;7.32e-07;10!UBERON:0009773;7.32e-07;10!UBERON:0001231;7.32e-07;10!UBERON:0004810;7.32e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.30e-41,14;UBERON:0000158,1.30e-41,14;UBERON:0000305,1.91e-26,7;UBERON:0000478,1.05e-23,24;UBERON:0004871,3.96e-23,8;UBERON:0001987,1.67e-17,4;UBERON:0004340,1.67e-17,4;UBERON:0003124,2.56e-17,7;UBERON:0003567,5.71e-15,2;UBERON:0003838,5.71e-15,2;UBERON:0003586,5.71e-15,2;UBERON:0005169,5.71e-15,2;UBERON:0002321,5.71e-15,2;UBERON:0005215,5.71e-15,2;UBERON:0002303,5.71e-15,2;UBERON:0002319,5.71e-15,2;UBERON:0004923,1.62e-09,66;UBERON:0004913,1.10e-08,1;UBERON:0003703,1.10e-08,1;UBERON:0001174,1.10e-08,1;UBERON:0004914,1.10e-08,1;UBERON:0001008,1.86e-08,48;UBERON:0000996,2.46e-08,1;UBERON:0003975,4.38e-08,22;UBERON:0003891,6.25e-08,4;UBERON:0004119,3.69e-07,160;UBERON:0000925,3.69e-07,160;UBERON:0006595,3.69e-07,160;UBERON:0004175,4.36e-07,25;UBERON:0004810,7.63e-07,10 | |||
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| ||
|short_description=p2@TH | |short_description=p2@TH | ||
}} | }} |
Revision as of 21:53, 18 November 2012
Short description: | p2@TH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TH_5end |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | -12bp_to_ENST00000461172_5end |
EntrezGene: | TH |
HGNC: | 11782 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.62e-30 | 19 |
placental epithelial cell | 3.89e-23 | 3 |
amniotic epithelial cell | 3.83e-16 | 2 |
mesangial cell | 5.71e-15 | 2 |
kidney interstitial cell | 5.71e-15 | 2 |
juxtaglomerular complex cell | 5.71e-15 | 2 |
renal interstitial pericyte | 5.71e-15 | 2 |
extraglomerular mesangial cell | 5.71e-15 | 2 |
amnion mesenchymal stem cell | 7.24e-14 | 5 |
smooth muscle cell of the esophagus | 1.18e-08 | 1 |
pericyte cell | 6.25e-08 | 4 |
kidney tubule cell | 7.63e-07 | 10 |
nephron tubule epithelial cell | 7.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.30e-41 | 14 |
membranous layer | 1.30e-41 | 14 |
amnion | 1.91e-26 | 7 |
extraembryonic structure | 1.05e-23 | 24 |
somatic layer of lateral plate mesoderm | 3.96e-23 | 8 |
placenta | 1.67e-17 | 4 |
allantois | 1.67e-17 | 4 |
chorion | 2.56e-17 | 7 |
abdomen connective tissue | 5.71e-15 | 2 |
abdominal segment connective tissue | 5.71e-15 | 2 |
trunk connective tissue | 5.71e-15 | 2 |
interstitial tissue | 5.71e-15 | 2 |
extraglomerular mesangium | 5.71e-15 | 2 |
kidney interstitium | 5.71e-15 | 2 |
juxtaglomerular apparatus | 5.71e-15 | 2 |
mesangium | 5.71e-15 | 2 |
organ component layer | 1.62e-09 | 66 |
hepatopancreatic ampulla | 1.10e-08 | 1 |
extrahepatic bile duct | 1.10e-08 | 1 |
common bile duct | 1.10e-08 | 1 |
duodenal papilla | 1.10e-08 | 1 |
renal system | 1.86e-08 | 48 |
vagina | 2.46e-08 | 1 |
internal female genitalia | 4.38e-08 | 22 |
stroma | 6.25e-08 | 4 |
endoderm-derived structure | 3.69e-07 | 160 |
endoderm | 3.69e-07 | 160 |
presumptive endoderm | 3.69e-07 | 160 |
internal genitalia | 4.36e-07 | 25 |
nephron tubule epithelium | 7.63e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.