FFCP PHASE1:Hg19::chr17:78865226..78865237,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.98e-15;3!CL:0000306;1.40e-11;4!CL:0002222;1.40e-11;4!CL:0002224;1.40e-11;4 | |ontology_enrichment_celltype_v019=CL:0000322;3.98e-15;3!CL:0000306;1.40e-11;4!CL:0002222;1.40e-11;4!CL:0002224;1.40e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.54e-15,3;CL:0000306,1.26e-11,4;CL:0002222,1.26e-11,4;CL:0002224,1.26e-11,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;3.52e-22;2!DOID:0060085;9.10e-12;1!DOID:3165;9.10e-12;1!DOID:0060121;9.10e-12;1!DOID:2438;9.10e-12;1!DOID:4418;9.10e-12;1!DOID:3347;9.10e-12;1!DOID:3908;1.91e-09;5!DOID:201;7.07e-08;6!DOID:0060100;7.07e-08;6!DOID:1325;5.50e-07;7!DOID:3904;5.50e-07;7 | |ontology_enrichment_disease_v019=DOID:3910;3.52e-22;2!DOID:0060085;9.10e-12;1!DOID:3165;9.10e-12;1!DOID:0060121;9.10e-12;1!DOID:2438;9.10e-12;1!DOID:4418;9.10e-12;1!DOID:3347;9.10e-12;1!DOID:3908;1.91e-09;5!DOID:201;7.07e-08;6!DOID:0060100;7.07e-08;6!DOID:1325;5.50e-07;7!DOID:3904;5.50e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,7.44e-22,2;DOID:3347,6.26e-12,1;DOID:0060085,9.61e-12,1;DOID:3165,9.61e-12,1;DOID:0060121,9.61e-12,1;DOID:2438,9.61e-12,1;DOID:4418,9.61e-12,1;DOID:3908,2.57e-09,5;DOID:201,6.38e-08,6;DOID:0060100,6.38e-08,6;DOID:1325,6.78e-07,7;DOID:3904,6.78e-07,7 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.52e-22;2!UBERON:0002173;3.52e-22;2!UBERON:0002186;3.52e-22;2!UBERON:0004821;3.98e-15;3!UBERON:0007499;3.98e-15;3!UBERON:0003215;3.98e-15;3!UBERON:0010368;3.98e-15;3!UBERON:0009911;3.98e-15;3!UBERON:0002299;3.98e-15;3!UBERON:0006524;3.98e-15;3!UBERON:0008874;3.98e-15;3!UBERON:0002169;3.98e-15;3!UBERON:0004894;3.98e-15;3!UBERON:0010077;1.40e-11;4!UBERON:0005389;1.40e-11;4!UBERON:0000484;1.40e-11;4!UBERON:0009856;1.40e-11;4!UBERON:0000965;1.40e-11;4!UBERON:0001803;1.40e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;3.52e-22;2!UBERON:0002173;3.52e-22;2!UBERON:0002186;3.52e-22;2!UBERON:0004821;3.98e-15;3!UBERON:0007499;3.98e-15;3!UBERON:0003215;3.98e-15;3!UBERON:0010368;3.98e-15;3!UBERON:0009911;3.98e-15;3!UBERON:0002299;3.98e-15;3!UBERON:0006524;3.98e-15;3!UBERON:0008874;3.98e-15;3!UBERON:0002169;3.98e-15;3!UBERON:0004894;3.98e-15;3!UBERON:0010077;1.40e-11;4!UBERON:0005389;1.40e-11;4!UBERON:0000484;1.40e-11;4!UBERON:0009856;1.40e-11;4!UBERON:0000965;1.40e-11;4!UBERON:0001803;1.40e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.44e-22,2;UBERON:0002173,7.44e-22,2;UBERON:0002186,7.44e-22,2;UBERON:0004821,6.54e-15,3;UBERON:0003215,6.54e-15,3;UBERON:0010368,6.54e-15,3;UBERON:0009911,6.54e-15,3;UBERON:0002299,6.54e-15,3;UBERON:0006524,6.54e-15,3;UBERON:0008874,6.54e-15,3;UBERON:0002169,6.54e-15,3;UBERON:0004894,6.54e-15,3;UBERON:0010077,1.26e-11,4;UBERON:0005389,1.26e-11,4;UBERON:0000484,1.26e-11,4;UBERON:0002546,1.26e-11,4;UBERON:0000965,1.26e-11,4;UBERON:0001803,1.26e-11,4;UBERON:0003073,1.26e-11,4;UBERON:0005426,1.26e-11,4 | |||
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| ||
|short_description=p@chr17:78865226..78865237,+ | |short_description=p@chr17:78865226..78865237,+ | ||
}} | }} |
Revision as of 18:07, 18 November 2012
Short description: | p@chr17:78865226..78865237, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:78865226..78865237, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.54e-15 | 3 |
crystallin accumulating cell | 1.26e-11 | 4 |
vertebrate lens cell | 1.26e-11 | 4 |
lens epithelial cell | 1.26e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.44e-22 | 2 |
alveolar duct | 7.44e-22 | 2 |
bronchiole | 7.44e-22 | 2 |
pulmonary alveolus epithelium | 6.54e-15 | 3 |
alveolus | 6.54e-15 | 3 |
pulmonary lobule | 6.54e-15 | 3 |
lobule | 6.54e-15 | 3 |
alveolus of lung | 6.54e-15 | 3 |
alveolar system | 6.54e-15 | 3 |
pulmonary acinus | 6.54e-15 | 3 |
alveolar sac | 6.54e-15 | 3 |
alveolar wall | 6.54e-15 | 3 |
cuboidal epithelium | 1.26e-11 | 4 |
transparent eye structure | 1.26e-11 | 4 |
simple cuboidal epithelium | 1.26e-11 | 4 |
cranial placode | 1.26e-11 | 4 |
lens of camera-type eye | 1.26e-11 | 4 |
epithelium of lens | 1.26e-11 | 4 |
lens placode | 1.26e-11 | 4 |
lens vesicle | 1.26e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.44e-22 | 2 |
osteosarcoma | 6.26e-12 | 1 |
organ system benign neoplasm | 9.61e-12 | 1 |
skin benign neoplasm | 9.61e-12 | 1 |
integumentary system benign neoplasm | 9.61e-12 | 1 |
dermis tumor | 9.61e-12 | 1 |
cutaneous fibrous histiocytoma | 9.61e-12 | 1 |
non-small cell lung carcinoma | 2.57e-09 | 5 |
connective tissue cancer | 6.38e-08 | 6 |
musculoskeletal system cancer | 6.38e-08 | 6 |
bronchus cancer | 6.78e-07 | 7 |
bronchogenic carcinoma | 6.78e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.