FFCP PHASE1:Hg19::chr9:131447422..131447435,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.72e-20!254;CL:0002076!5.55e-09!43;CL:0002251!5.77e-09!21;CL:0000223!1.54e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.72e-20!254;CL:0002076!5.55e-09!43;CL:0002251!5.77e-09!21;CL:0000223!1.54e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002336;1.07e-11;1!CL:0002261;1.07e-11;1!CL:0002170;1.07e-11;1 | |ontology_enrichment_celltype_v019=CL:0002336;1.07e-11;1!CL:0002261;1.07e-11;1!CL:0002170;1.07e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002336,1.81e-11,1;CL:0002261,1.81e-11,1;CL:0002170,1.81e-11,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!5.10e-24!106;DOID:0050687!1.64e-20!143;DOID:14566!4.50e-20!239;DOID:162!4.40e-18!235;DOID:1749!3.30e-12!14 | |ontology_enrichment_disease=DOID:305!5.10e-24!106;DOID:0050687!1.64e-20!143;DOID:14566!4.50e-20!239;DOID:162!4.40e-18!235;DOID:1749!3.30e-12!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.29e-15;3!DOID:127;9.29e-15;3!DOID:1749;1.38e-12;14!DOID:3151;1.07e-11;1!DOID:3149;1.07e-11;1!DOID:0060072;2.63e-11;4!DOID:4074;9.69e-07;2!DOID:4905;9.69e-07;2!DOID:3498;9.69e-07;2 | |ontology_enrichment_disease_v019=DOID:0060084;9.29e-15;3!DOID:127;9.29e-15;3!DOID:1749;1.38e-12;14!DOID:3151;1.07e-11;1!DOID:3149;1.07e-11;1!DOID:0060072;2.63e-11;4!DOID:4074;9.69e-07;2!DOID:4905;9.69e-07;2!DOID:3498;9.69e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.23e-14,3;DOID:127,1.23e-14,3;DOID:1749,1.28e-12,14;DOID:3151,9.61e-12,1;DOID:3149,9.61e-12,1;DOID:0060072,3.24e-11,4;DOID:4074,9.96e-07,2;DOID:4905,9.96e-07,2;DOID:3498,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.00e-09!72;UBERON:0004119!3.72e-09!169;UBERON:0000925!3.72e-09!169;UBERON:0006595!3.72e-09!169;UBERON:0001007!3.77e-09!155;UBERON:0001555!3.77e-09!155;UBERON:0007026!3.77e-09!155;UBERON:0001041!3.28e-08!98;UBERON:0008947!1.66e-07!38;UBERON:0003258!1.66e-07!38;UBERON:0000072!1.90e-07!46;UBERON:0000077!3.74e-07!130;UBERON:0003729!4.48e-07!5;UBERON:0000065!8.17e-07!53 | |ontology_enrichment_uberon=UBERON:0001004!3.00e-09!72;UBERON:0004119!3.72e-09!169;UBERON:0000925!3.72e-09!169;UBERON:0006595!3.72e-09!169;UBERON:0001007!3.77e-09!155;UBERON:0001555!3.77e-09!155;UBERON:0007026!3.77e-09!155;UBERON:0001041!3.28e-08!98;UBERON:0008947!1.66e-07!38;UBERON:0003258!1.66e-07!38;UBERON:0000072!1.90e-07!46;UBERON:0000077!3.74e-07!130;UBERON:0003729!4.48e-07!5;UBERON:0000065!8.17e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.63e-12;1!UBERON:0005056;2.63e-12;1!UBERON:0004176;2.63e-12;1!UBERON:0003343;9.37e-12;4!UBERON:0004785;9.37e-12;4!UBERON:0000974;3.97e-08;6!UBERON:0005910;5.95e-08;6!UBERON:0003729;6.25e-08;13 | |ontology_enrichment_uberon_v019=UBERON:0000997;2.63e-12;1!UBERON:0005056;2.63e-12;1!UBERON:0004176;2.63e-12;1!UBERON:0003343;9.37e-12;4!UBERON:0004785;9.37e-12;4!UBERON:0000974;3.97e-08;6!UBERON:0005910;5.95e-08;6!UBERON:0003729;6.25e-08;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.63e-12,1;UBERON:0005056,2.63e-12,1;UBERON:0003343,9.13e-12,4;UBERON:0004785,9.13e-12,4;UBERON:0003729,6.95e-08,13;UBERON:0005910,7.08e-08,6 | |||
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| ||
|short_description=p12@SET | |short_description=p12@SET | ||
}} | }} |
Revision as of 16:21, 18 November 2012
Short description: | p12@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SET_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_NM_001248000_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | Q5VXV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 1.81e-11 | 1 |
endothelial cell of viscerocranial mucosa | 1.81e-11 | 1 |
keratinized cell of the oral mucosa | 1.81e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.63e-12 | 1 |
external female genitalia | 2.63e-12 | 1 |
mucosa of oral region | 9.13e-12 | 4 |
respiratory system mucosa | 9.13e-12 | 4 |
mouth mucosa | 6.95e-08 | 13 |
transitional epithelium | 7.08e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.23e-14 | 3 |
leiomyoma | 1.23e-14 | 3 |
squamous cell carcinoma | 1.28e-12 | 14 |
skin squamous cell carcinoma | 9.61e-12 | 1 |
keratoacanthoma | 9.61e-12 | 1 |
benign neoplasm | 3.24e-11 | 4 |
pancreas adenocarcinoma | 9.96e-07 | 2 |
pancreatic carcinoma | 9.96e-07 | 2 |
pancreatic ductal adenocarcinoma | 9.96e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.