FFCP PHASE1:Hg19::chr18:45457558..45457570,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000860!1.97e-12!45;CL:0002009!5.71e-11!65;CL:0002194!9.88e-11!63;CL:0000576!9.88e-11!63;CL:0000040!9.88e-11!63;CL:0000559!9.88e-11!63;CL:0002057!9.90e-11!42;CL:0000557!6.19e-10!71;CL:0000839!1.69e-09!70;CL:0002087!9.88e-09!119;CL:0000766!1.68e-08!76;CL:0000763!2.36e-08!112;CL:0000049!2.36e-08!112;CL:0000037!3.96e-08!172;CL:0000566!3.96e-08!172;CL:0000988!5.31e-08!182;CL:0002031!1.08e-07!124;CL:0002032!1.59e-07!165;CL:0000837!1.59e-07!165;CL:0000738!1.92e-07!140 | |ontology_enrichment_celltype=CL:0000860!1.97e-12!45;CL:0002009!5.71e-11!65;CL:0002194!9.88e-11!63;CL:0000576!9.88e-11!63;CL:0000040!9.88e-11!63;CL:0000559!9.88e-11!63;CL:0002057!9.90e-11!42;CL:0000557!6.19e-10!71;CL:0000839!1.69e-09!70;CL:0002087!9.88e-09!119;CL:0000766!1.68e-08!76;CL:0000763!2.36e-08!112;CL:0000049!2.36e-08!112;CL:0000037!3.96e-08!172;CL:0000566!3.96e-08!172;CL:0000988!5.31e-08!182;CL:0002031!1.08e-07!124;CL:0002032!1.59e-07!165;CL:0000837!1.59e-07!165;CL:0000738!1.92e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.05e-16;33!CL:0002057;9.05e-16;33!CL:0000576;1.62e-13;48!CL:0000473;5.87e-12;39!CL:0000234;5.87e-12;39 | |ontology_enrichment_celltype_v019=CL:0000860;9.05e-16;33!CL:0002057;9.05e-16;33!CL:0000576;1.62e-13;48!CL:0000473;5.87e-12;39!CL:0000234;5.87e-12;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.63e-17,42;CL:0002057,3.63e-17,42;CL:0000473,1.73e-14,48;CL:0000234,1.73e-14,48;CL:0002194,2.92e-12,59;CL:0000576,2.92e-12,59;CL:0000040,2.92e-12,59;CL:0000559,2.92e-12,59;CL:0002009,1.00e-11,61;CL:0000557,1.14e-11,67;CL:0000839,1.58e-10,66;CL:0000766,2.59e-09,72;CL:0000763,3.54e-09,108;CL:0000049,3.54e-09,108;CL:0000037,2.47e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-14;42!UBERON:0008947;6.77e-09;29 | |ontology_enrichment_development_v019=CL:0002057;3.40e-14;42!UBERON:0008947;6.77e-09;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-08!102;UBERON:0003061!1.33e-08!102;UBERON:0002371!1.37e-08!80;UBERON:0002193!3.10e-08!112;UBERON:0001474!4.67e-08!86;UBERON:0004765!2.46e-07!101;UBERON:0001434!2.46e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!1.33e-08!102;UBERON:0003061!1.33e-08!102;UBERON:0002371!1.37e-08!80;UBERON:0002193!3.10e-08!112;UBERON:0001474!4.67e-08!86;UBERON:0004765!2.46e-07!101;UBERON:0001434!2.46e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.39e-16;9!UBERON:0001557;1.39e-16;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.39e-16;9!UBERON:0001557;1.39e-16;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.93e-17,9;UBERON:0002371,4.26e-11,76;UBERON:0001474,6.02e-10,82;UBERON:0001557,1.22e-09,19;UBERON:0002390,1.25e-09,98;UBERON:0003061,1.25e-09,98;UBERON:0002405,2.67e-09,93;UBERON:0004765,1.17e-08,90;UBERON:0002193,2.83e-08,108;UBERON:0001434,2.37e-07,100 | |||
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| ||
|short_description=p9@SMAD2 | |short_description=p9@SMAD2 | ||
}} | }} |
Revision as of 14:34, 18 November 2012
Short description: | p9@SMAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SMAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000356825, NM_001135937, uc002lcz.2, uc010xdc.1, uc010xdd.1_5end |
EntrezGene: | SMAD2 |
HGNC: | 6768 |
UniProt: | Q15796 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.63e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-17 | 42 |
defensive cell | 1.73e-14 | 48 |
phagocyte | 1.73e-14 | 48 |
monopoietic cell | 2.92e-12 | 59 |
monocyte | 2.92e-12 | 59 |
monoblast | 2.92e-12 | 59 |
promonocyte | 2.92e-12 | 59 |
macrophage dendritic cell progenitor | 1.00e-11 | 61 |
granulocyte monocyte progenitor cell | 1.14e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.58e-10 | 66 |
myeloid leukocyte | 2.59e-09 | 72 |
myeloid cell | 3.54e-09 | 108 |
common myeloid progenitor | 3.54e-09 | 108 |
hematopoietic stem cell | 2.47e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.93e-17 | 9 |
bone marrow | 4.26e-11 | 76 |
bone element | 6.02e-10 | 82 |
upper respiratory tract | 1.22e-09 | 19 |
hematopoietic system | 1.25e-09 | 98 |
blood island | 1.25e-09 | 98 |
immune system | 2.67e-09 | 93 |
skeletal element | 1.17e-08 | 90 |
hemolymphoid system | 2.83e-08 | 108 |
skeletal system | 2.37e-07 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.