FFCP PHASE1:Hg19::chr8:42044953..42044969,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000183!4.69e-19!59;CL:0000680!1.89e-18!57;CL:0000056!1.89e-18!57;CL:0000355!1.89e-18!57;CL:0000192!2.97e-18!42;CL:0000514!2.97e-18!42;CL:0000187!1.69e-17!54;CL:0000359!2.03e-15!32;CL:0000393!1.18e-14!60;CL:0000211!1.18e-14!60;CL:0000055!2.63e-13!180;CL:0000222!5.99e-11!119;CL:0002494!2.15e-07!16 | |ontology_enrichment_celltype=CL:0000183!4.69e-19!59;CL:0000680!1.89e-18!57;CL:0000056!1.89e-18!57;CL:0000355!1.89e-18!57;CL:0000192!2.97e-18!42;CL:0000514!2.97e-18!42;CL:0000187!1.69e-17!54;CL:0000359!2.03e-15!32;CL:0000393!1.18e-14!60;CL:0000211!1.18e-14!60;CL:0000055!2.63e-13!180;CL:0000222!5.99e-11!119;CL:0002494!2.15e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.93e-21;5!CL:0000359;1.26e-15;32!CL:0002593;1.88e-14;2!CL:0000192;1.37e-13;43!CL:0002591;2.99e-08;1!CL:0002379;3.80e-08;1!CL:0002581;5.89e-08;1!CL:0000342;1.18e-07;1!CL:0002565;1.18e-07;1!CL:0002616;1.18e-07;1 | |ontology_enrichment_celltype_v019=CL:0002595;1.93e-21;5!CL:0000359;1.26e-15;32!CL:0002593;1.88e-14;2!CL:0000192;1.37e-13;43!CL:0002591;2.99e-08;1!CL:0002379;3.80e-08;1!CL:0002581;5.89e-08;1!CL:0000342;1.18e-07;1!CL:0002565;1.18e-07;1!CL:0002616;1.18e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.27e-21,5;CL:0000192,1.66e-16,43;CL:0000514,1.66e-16,43;CL:0000359,2.44e-15,32;CL:0000187,7.25e-15,55;CL:0002593,1.89e-14,2;CL:0000680,5.58e-14,58;CL:0000056,5.58e-14,58;CL:0000355,5.58e-14,58;CL:0000393,3.51e-13,61;CL:0000211,3.51e-13,61;CL:0002591,3.10e-08,1;CL:0002379,3.80e-08,1;CL:0002581,5.33e-08,1;CL:0002616,8.51e-08,1;CL:0000222,9.20e-08,121;CL:0000342,1.87e-07,1;CL:0002565,1.87e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.37e-13;43 | |ontology_enrichment_development_v019=CL:0000514;1.37e-13;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.71e-21;3!DOID:127;2.71e-21;3!DOID:0060072;4.11e-16;4!DOID:3620;3.80e-08;1!DOID:3565;3.80e-08;1 | |ontology_enrichment_disease_v019=DOID:0060084;2.71e-21;3!DOID:127;2.71e-21;3!DOID:0060072;4.11e-16;4!DOID:3620;3.80e-08;1!DOID:3565;3.80e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.72e-21,3;DOID:127,2.72e-21,3;DOID:0060072,4.12e-16,4;DOID:3620,3.80e-08,1;DOID:3565,3.80e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.18e-17!63;UBERON:0001015!1.18e-17!63;UBERON:0000383!1.18e-17!63;UBERON:0004573!1.26e-16!33;UBERON:0004571!1.26e-16!33;UBERON:0000914!1.41e-16!83;UBERON:0002329!1.41e-16!83;UBERON:0003077!1.41e-16!83;UBERON:0003059!1.41e-16!83;UBERON:0007282!1.41e-16!83;UBERON:0009618!1.41e-16!83;UBERON:0007285!1.41e-16!83;UBERON:0001134!1.80e-16!61;UBERON:0002036!1.80e-16!61;UBERON:0003082!1.80e-16!61;UBERON:0004290!9.95e-16!70;UBERON:0005256!2.36e-15!143;UBERON:0001637!2.88e-15!42;UBERON:0003509!2.88e-15!42;UBERON:0004572!2.88e-15!42;UBERON:0000486!1.43e-12!82;UBERON:0002049!4.55e-12!79;UBERON:0007798!4.55e-12!79;UBERON:0003914!8.38e-12!118;UBERON:0004872!1.08e-11!84;UBERON:0000490!6.44e-11!138;UBERON:0002100!7.52e-11!216;UBERON:0001981!8.72e-11!60;UBERON:0007500!8.72e-11!60;UBERON:0004537!8.72e-11!60;UBERON:0006965!8.72e-11!60;UBERON:0001135!9.32e-11!15;UBERON:0004535!1.15e-10!110;UBERON:0001009!4.78e-10!113;UBERON:0000481!2.22e-09!347;UBERON:0000055!5.22e-09!69;UBERON:0000119!1.39e-08!312;UBERON:0000483!2.01e-08!309;UBERON:0000475!3.16e-08!365;UBERON:0003104!2.91e-07!238;UBERON:0009142!2.91e-07!238;UBERON:0002203!5.25e-07!6;UBERON:0001768!5.25e-07!6;UBERON:0000947!6.81e-07!21;UBERON:0010191!6.81e-07!21;UBERON:0000477!6.98e-07!286 | |ontology_enrichment_uberon=UBERON:0002385!1.18e-17!63;UBERON:0001015!1.18e-17!63;UBERON:0000383!1.18e-17!63;UBERON:0004573!1.26e-16!33;UBERON:0004571!1.26e-16!33;UBERON:0000914!1.41e-16!83;UBERON:0002329!1.41e-16!83;UBERON:0003077!1.41e-16!83;UBERON:0003059!1.41e-16!83;UBERON:0007282!1.41e-16!83;UBERON:0009618!1.41e-16!83;UBERON:0007285!1.41e-16!83;UBERON:0001134!1.80e-16!61;UBERON:0002036!1.80e-16!61;UBERON:0003082!1.80e-16!61;UBERON:0004290!9.95e-16!70;UBERON:0005256!2.36e-15!143;UBERON:0001637!2.88e-15!42;UBERON:0003509!2.88e-15!42;UBERON:0004572!2.88e-15!42;UBERON:0000486!1.43e-12!82;UBERON:0002049!4.55e-12!79;UBERON:0007798!4.55e-12!79;UBERON:0003914!8.38e-12!118;UBERON:0004872!1.08e-11!84;UBERON:0000490!6.44e-11!138;UBERON:0002100!7.52e-11!216;UBERON:0001981!8.72e-11!60;UBERON:0007500!8.72e-11!60;UBERON:0004537!8.72e-11!60;UBERON:0006965!8.72e-11!60;UBERON:0001135!9.32e-11!15;UBERON:0004535!1.15e-10!110;UBERON:0001009!4.78e-10!113;UBERON:0000481!2.22e-09!347;UBERON:0000055!5.22e-09!69;UBERON:0000119!1.39e-08!312;UBERON:0000483!2.01e-08!309;UBERON:0000475!3.16e-08!365;UBERON:0003104!2.91e-07!238;UBERON:0009142!2.91e-07!238;UBERON:0002203!5.25e-07!6;UBERON:0001768!5.25e-07!6;UBERON:0000947!6.81e-07!21;UBERON:0010191!6.81e-07!21;UBERON:0000477!6.98e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0003513;2.69e-23;7!UBERON:0003834;1.93e-21;5!UBERON:0001533;1.93e-21;5!UBERON:0002456;1.88e-14;2!UBERON:0005406;6.40e-14;2!UBERON:0004573;7.68e-14;33!UBERON:0004571;7.68e-14;33!UBERON:0001637;1.31e-11;42!UBERON:0003509;1.31e-11;42!UBERON:0004572;1.31e-11;42!UBERON:0002506;1.18e-07;1!UBERON:0001769;1.18e-07;1!UBERON:0003914;1.86e-07;74!UBERON:0001135;5.46e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0003513;2.69e-23;7!UBERON:0003834;1.93e-21;5!UBERON:0001533;1.93e-21;5!UBERON:0002456;1.88e-14;2!UBERON:0005406;6.40e-14;2!UBERON:0004573;7.68e-14;33!UBERON:0004571;7.68e-14;33!UBERON:0001637;1.31e-11;42!UBERON:0003509;1.31e-11;42!UBERON:0004572;1.31e-11;42!UBERON:0002506;1.18e-07;1!UBERON:0001769;1.18e-07;1!UBERON:0003914;1.86e-07;74!UBERON:0001135;5.46e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.04e-23,7;UBERON:0003834,1.27e-21,5;UBERON:0001533,1.27e-21,5;UBERON:0004573,8.57e-15,33;UBERON:0004571,8.57e-15,33;UBERON:0002456,1.89e-14,2;UBERON:0005406,4.18e-14,2;UBERON:0001637,4.63e-14,42;UBERON:0003509,4.63e-14,42;UBERON:0004572,4.63e-14,42;UBERON:0007503,1.53e-13,78;UBERON:0001134,6.23e-13,62;UBERON:0002036,6.23e-13,62;UBERON:0003082,6.23e-13,62;UBERON:0002385,1.86e-12,64;UBERON:0001015,1.86e-12,64;UBERON:0000383,1.86e-12,64;UBERON:0007500,1.63e-11,59;UBERON:0001981,1.63e-11,59;UBERON:0004537,1.63e-11,59;UBERON:0006965,1.63e-11,59;UBERON:0002329,5.24e-11,71;UBERON:0003059,5.24e-11,71;UBERON:0007282,5.24e-11,71;UBERON:0004290,5.24e-11,71;UBERON:0009618,5.24e-11,71;UBERON:0003077,8.00e-11,72;UBERON:0007285,8.00e-11,72;UBERON:0004872,8.38e-11,83;UBERON:0007524,1.21e-10,73;UBERON:0002049,7.94e-10,78;UBERON:0007798,7.94e-10,78;UBERON:0000055,9.98e-10,68;UBERON:0003914,1.70e-09,117;UBERON:0000486,4.30e-09,83;UBERON:0004535,5.95e-09,109;UBERON:0005256,5.96e-09,122;UBERON:0001009,1.22e-08,112;UBERON:0002506,1.87e-07,1;UBERON:0001769,1.87e-07,1;UBERON:0001135,4.84e-07,15;UBERON:0000490,6.82e-07,148 | |||
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|short_description=p@chr8:42044953..42044969,- | |short_description=p@chr8:42044953..42044969,- | ||
}} | }} |
Revision as of 08:15, 18 November 2012
Short description: | p@chr8:42044953..42044969, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:42044953..42044969, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.27e-21 | 5 |
smooth muscle cell | 1.66e-16 | 43 |
smooth muscle myoblast | 1.66e-16 | 43 |
vascular associated smooth muscle cell | 2.44e-15 | 32 |
muscle cell | 7.25e-15 | 55 |
smooth muscle cell of the internal thoracic artery | 1.89e-14 | 2 |
muscle precursor cell | 5.58e-14 | 58 |
myoblast | 5.58e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.58e-14 | 58 |
electrically responsive cell | 3.51e-13 | 61 |
electrically active cell | 3.51e-13 | 61 |
smooth muscle cell of the pulmonary artery | 3.10e-08 | 1 |
meningothelial cell | 3.80e-08 | 1 |
perirenal preadipocyte | 5.33e-08 | 1 |
perirenal adipocyte cell | 8.51e-08 | 1 |
mesodermal cell | 9.20e-08 | 121 |
pigment cell (sensu Vertebrata) | 1.87e-07 | 1 |
iris pigment epithelial cell | 1.87e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.72e-21 | 3 |
leiomyoma | 2.72e-21 | 3 |
benign neoplasm | 4.12e-16 | 4 |
central nervous system cancer | 3.80e-08 | 1 |
meningioma | 3.80e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.