FFCP PHASE1:Hg19::chr17:59477233..59477263,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.00e-29!180;CL:0000183!7.40e-15!59;CL:0000680!1.13e-14!57;CL:0000056!1.13e-14!57;CL:0000355!1.13e-14!57;CL:0000187!3.64e-14!54;CL:0000057!8.49e-13!75;CL:0000192!6.39e-12!42;CL:0000514!6.39e-12!42;CL:0000393!5.95e-11!60;CL:0000211!5.95e-11!60;CL:0000359!2.11e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.00e-29!180;CL:0000183!7.40e-15!59;CL:0000680!1.13e-14!57;CL:0000056!1.13e-14!57;CL:0000355!1.13e-14!57;CL:0000187!3.64e-14!54;CL:0000057!8.49e-13!75;CL:0000192!6.39e-12!42;CL:0000514!6.39e-12!42;CL:0000393!5.95e-11!60;CL:0000211!5.95e-11!60;CL:0000359!2.11e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000192;8.40e-09;43!CL:0000187;1.54e-08;55!CL:0000393;5.17e-07;61!CL:0000211;5.17e-07;61 | |ontology_enrichment_celltype_v019=CL:0000192;8.40e-09;43!CL:0000187;1.54e-08;55!CL:0000393;5.17e-07;61!CL:0000211;5.17e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.68e-15,58;CL:0000056,2.68e-15,58;CL:0000355,2.68e-15,58;CL:0000187,9.18e-15,55;CL:0000057,1.11e-13,76;CL:0000192,2.10e-12,43;CL:0000514,2.10e-12,43;CL:0000393,9.86e-12,61;CL:0000211,9.86e-12,61;CL:0000359,3.73e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;8.40e-09;43!CL:0000355;1.20e-08;58 | |ontology_enrichment_development_v019=CL:0000514;8.40e-09;43!CL:0000355;1.20e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.03e-22!365;UBERON:0000481!2.01e-21!347;UBERON:0000914!9.42e-19!83;UBERON:0002329!9.42e-19!83;UBERON:0003077!9.42e-19!83;UBERON:0003059!9.42e-19!83;UBERON:0007282!9.42e-19!83;UBERON:0009618!9.42e-19!83;UBERON:0007285!9.42e-19!83;UBERON:0002100!7.54e-18!216;UBERON:0004290!2.79e-17!70;UBERON:0005256!7.39e-17!143;UBERON:0002385!7.42e-16!63;UBERON:0001015!7.42e-16!63;UBERON:0000383!7.42e-16!63;UBERON:0001134!2.98e-15!61;UBERON:0002036!2.98e-15!61;UBERON:0003082!2.98e-15!61;UBERON:0003104!5.13e-15!238;UBERON:0009142!5.13e-15!238;UBERON:0000486!3.96e-14!82;UBERON:0000468!2.99e-10!659;UBERON:0000119!3.97e-10!312;UBERON:0000483!7.17e-10!309;UBERON:0000477!9.95e-08!286;UBERON:0003102!1.26e-07!95;UBERON:0000467!7.38e-07!625 | |ontology_enrichment_uberon=UBERON:0000475!2.03e-22!365;UBERON:0000481!2.01e-21!347;UBERON:0000914!9.42e-19!83;UBERON:0002329!9.42e-19!83;UBERON:0003077!9.42e-19!83;UBERON:0003059!9.42e-19!83;UBERON:0007282!9.42e-19!83;UBERON:0009618!9.42e-19!83;UBERON:0007285!9.42e-19!83;UBERON:0002100!7.54e-18!216;UBERON:0004290!2.79e-17!70;UBERON:0005256!7.39e-17!143;UBERON:0002385!7.42e-16!63;UBERON:0001015!7.42e-16!63;UBERON:0000383!7.42e-16!63;UBERON:0001134!2.98e-15!61;UBERON:0002036!2.98e-15!61;UBERON:0003082!2.98e-15!61;UBERON:0003104!5.13e-15!238;UBERON:0009142!5.13e-15!238;UBERON:0000486!3.96e-14!82;UBERON:0000468!2.99e-10!659;UBERON:0000119!3.97e-10!312;UBERON:0000483!7.17e-10!309;UBERON:0000477!9.95e-08!286;UBERON:0003102!1.26e-07!95;UBERON:0000467!7.38e-07!625 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.80e-20,160;UBERON:0009142,5.80e-20,160;UBERON:0007524,2.41e-18,73;UBERON:0002329,4.91e-18,71;UBERON:0003059,4.91e-18,71;UBERON:0007282,4.91e-18,71;UBERON:0004290,4.91e-18,71;UBERON:0009618,4.91e-18,71;UBERON:0003077,6.38e-18,72;UBERON:0007285,6.38e-18,72;UBERON:0007503,5.34e-17,78;UBERON:0002385,1.54e-16,64;UBERON:0001015,1.54e-16,64;UBERON:0000383,1.54e-16,64;UBERON:0005256,3.94e-16,122;UBERON:0001134,6.59e-16,62;UBERON:0002036,6.59e-16,62;UBERON:0003082,6.59e-16,62;UBERON:0002100,1.41e-15,199;UBERON:0000486,9.02e-15,83;UBERON:0000119,2.08e-10,309;UBERON:0000483,3.85e-10,306;UBERON:0000490,4.22e-08,148;UBERON:0003102,9.09e-07,99 | |||
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| ||
|short_description=p1@TBX2 | |short_description=p1@TBX2 | ||
}} | }} |
Revision as of 05:13, 18 November 2012
Short description: | p1@TBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TBX2_5end |
Coexpression cluster: | C2425_MCF7_Melanocyte_normal_Fibroblast_rhabdomyosarcoma_Smooth_lung |
Association with transcript: | 0bp_to_ENST00000240328, ENST00000424871, NM_005994, uc002ize.2, uc002izg.2, uc010wox.1_5end |
EntrezGene: | TBX2 |
HGNC: | 11597 |
UniProt: | Q13207 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.68e-15 | 58 |
myoblast | 2.68e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.68e-15 | 58 |
muscle cell | 9.18e-15 | 55 |
fibroblast | 1.11e-13 | 76 |
smooth muscle cell | 2.10e-12 | 43 |
smooth muscle myoblast | 2.10e-12 | 43 |
electrically responsive cell | 9.86e-12 | 61 |
electrically active cell | 9.86e-12 | 61 |
vascular associated smooth muscle cell | 3.73e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.80e-20 | 160 |
entire embryonic mesenchyme | 5.80e-20 | 160 |
dense mesenchyme tissue | 2.41e-18 | 73 |
somite | 4.91e-18 | 71 |
presomitic mesoderm | 4.91e-18 | 71 |
presumptive segmental plate | 4.91e-18 | 71 |
dermomyotome | 4.91e-18 | 71 |
trunk paraxial mesoderm | 4.91e-18 | 71 |
paraxial mesoderm | 6.38e-18 | 72 |
presumptive paraxial mesoderm | 6.38e-18 | 72 |
epithelial vesicle | 5.34e-17 | 78 |
muscle tissue | 1.54e-16 | 64 |
musculature | 1.54e-16 | 64 |
musculature of body | 1.54e-16 | 64 |
trunk mesenchyme | 3.94e-16 | 122 |
skeletal muscle tissue | 6.59e-16 | 62 |
striated muscle tissue | 6.59e-16 | 62 |
myotome | 6.59e-16 | 62 |
trunk | 1.41e-15 | 199 |
multilaminar epithelium | 9.02e-15 | 83 |
cell layer | 2.08e-10 | 309 |
epithelium | 3.85e-10 | 306 |
unilaminar epithelium | 4.22e-08 | 148 |
surface structure | 9.09e-07 | 99 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.